Lynx rufus (bobcat): 124525622
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Entry
124525622 CDS
T08475
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lruf01009
]
124525622
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124525622
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124525622
Protein phosphatases and associated proteins [BR:
lruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124525622
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Pre-60S particles
Helicases
124525622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124525622
NCBI-ProteinID:
XP_046954079
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MAAAGGLLLRAAESPAAAAPETLSGPRRAQARRQAEATKRKYRASGEAPPAKRRGAAACL
PAKKAAAEEARRTFKGTAQRTFSPNESLVGVSGKNREQKPCIRTSSLFKNNPEIPELHRP
VVKQVQEQVFTSDAFHKLDLHPHLISTINTVLNMTSMTSVQKQSIPVLLEGRDALVRSQT
GSGKTLAYCIPVVQSLQAMKSKIQRSDGPYALVLVPTRELALQSFNTVQKLLKPFTWIVP
GVLMGGERKKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRIRWLILDEADRILDLG
FEKDITVILNAVNAECQQRQNVLLSATLTEGVTRLADISLLDPVRISVLDQHHGQSDPER
GTLPEVSPLPPDEELDSFAIPGSLDQHVTLVPSKLKLVSLAAFILQKCKFEKDQKMIIFF
LSCELVEFYYHLFLRTLPTCSGAPASRQPPSASTRFKFLRLHGNMEQEERTAVFEEFSHS
KTGILLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCRGSSLLILAPSEA
EYVNSLASHKINVSEIHVEDILSVLTRDGCLEGSRRETQKSRAAGPQEIRRRATVLQTVF
EDYVHSSERRVSWAKKALQSFIRAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPQNLG
VSAVKRRKGNLNRPDLHKKTRGKHRLAEILRSEYSSGIEASVAKVKKQNKHAAPGSQPCR
AIRTGRPASAVGKQKQRSPCNGKTQRD
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccggcgggctgctcctccgcgctgccgagtccccggccgccgccgccccc
gagacgctctcgggaccccgccgggcccaggcgaggcggcaagcggaggctaccaaaaga
aagtaccgagcatccggtgaggctcccccagcgaagcggaggggcgcggcggcgtgtctc
ccagccaagaaagctgctgctgaagaagcacgaaggacttttaaggggacggcacagaga
acgttttctccgaatgaatctttggttggtgtgagcggtaaaaaccgagagcagaaacca
tgcattaggacttcttcgttatttaaaaacaaccccgaaattccagagctccacagacct
gtagtaaagcaggtgcaagaacaggtgttcacctcagacgcttttcacaaactggacctc
cacccacatttaatttccacgataaatacggtcttaaacatgactagcatgaccagcgtt
cagaagcaaagtattcccgtgttgctggagggcagagatgctctggtgaggtctcagacg
ggctcaggtaaaacgcttgcctactgtatccctgtggtccagtctcttcaagcaatgaaa
tcaaaaatacagcgcagtgatggcccctatgccctggtgctggtgccaacgagagagctg
gctctgcaaagcttcaacactgtccagaaactgcttaagccgttcacctggatcgtgcct
ggggtgctcatgggcggagagaggaagaagtccgaaaaggccagactccgcaaaggaata
aatatcctcatctcgactcctgggcgactggtggatcatatcaaatccacaaagaacatt
cattttagtcggatacggtggctgattttggatgaagcagacagaatcctggatttgggt
tttgaaaaggatatcacagtgatactcaatgccgtgaatgccgagtgccagcaacgacaa
aacgtgttgctgtcggccacactcacagaaggtgtgacgcggctggctgatatcagcttg
ctcgatccggtccggatttctgtcctggatcagcaccacgggcagtctgacccggagcga
ggcacacttcccgaggtttcccctctaccacctgacgaggagctggacagcttcgcgatt
ccaggaagtcttgatcagcatgtgacgctggttcccagcaaactgaagctcgtctccctg
gcggccttcatcctgcagaagtgcaagtttgagaaagaccagaagatgatcatctttttc
ttgagctgtgagctggtggagttctattaccacctcttcctccggaccctgccaacctgc
tcaggggcccccgcgtcacggcagccaccatctgcctccacgagattcaaattcctgcgg
ctgcacggcaacatggagcaggaggaaagaacagcggtgtttgaagaattctcacattcc
aagaccggcatcctcctctgcacggatgttgcagctcggggtttggatctccctcaagtc
acgtggattgttcagtacaacgctccgtcttcgcctgctgaatacatccaccggattggg
agaaccgcccggattggctgccgtgggagcagcctgctcatcttggctccttcggaggca
gaatatgtcaactcgttggcttctcacaaaatcaacgtgtctgagattcacgtggaagac
attttgtctgttctgacaagggacggttgtttggaagggagccgacgggaaacccagaaa
tcccgtgccgctggcccgcaggaaatccgacggcgagccacggtcttgcagacggtattt
gaagattacgtgcactccagtgagaggcgggtctcctgggcaaagaaagctctgcagtcc
ttcattcgagcctatgcaacctacccccgggagctgaagcacatcttccacgtccgatcc
ttgcaccttggtcatgtggctaagagctttgggctgagagatgccccccaaaatcttggt
gtctcggctgtaaagagaagaaaaggaaacctgaacaggcctgaccttcataagaagacc
cggggtaaacaccgccttgccgaaatcttgcgttcagaatactcaagtgggattgaggcc
agcgtcgccaaggtcaaaaagcaaaacaaacacgcggcgcccggcagccagccatgcaga
gccatccgcaccgggcgcccagcctcggccgtgggaaaacagaagcagcgctctccgtgc
aacggaaaaacccagagagactga
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