KEGG   Lynx rufus (bobcat): 124525809
Entry
124525809         CDS       T08475                                 
Name
(RefSeq) cullin-4B-like
  KO
K10609  cullin 4
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03420  Nucleotide excision repair
lruf04120  Ubiquitin mediated proteolysis
lruf05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124525809
  09124 Replication and repair
   03420 Nucleotide excision repair
    124525809
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124525809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lruf04121]
    124525809
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124525809
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lruf04147]
    124525809
Ubiquitin system [BR:lruf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     124525809
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124525809
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124525809
Exosome [BR:lruf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124525809
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW DUF2018
Other DBs
NCBI-GeneID: 124525809
NCBI-ProteinID: XP_046954347
LinkDB
Position
Unknown
AA seq 779 aa
MPQQDSSSFSAAAASQKQEQLKNVKLVVFSVAADRHNNDWTEAPTTLSSFASNTLGTGSV
KKLVIKNFKDKPLPLENYTEETWQKLKEAVQAIQNSISVKYSLEELYQSVENLCSYNLSA
NLYKQLKQLCEQHLKAQIHQFREDSVDNGPFLKKMDKCWQNHSRQMSMIRNIFLFLDRTY
AFQYLMLSSIWDMGLELFKSYIICDQNVRSRTIDGILVLIEKERNGEMVDRCLIQRLVTM
LSDLRIYQESFESKFLEETSRFYAAEGRKLVQKKEIPGCLYHIKKLLEGEVDRVRTYLCL
NTQKQLITMLEKQLLGEHLSAVLQKGLNFLLDENRIEDLSLVYQLFSRIECGFQVLLQHW
IEYIKKFGSSIVINPMKDKTMVQELLDFKDKIDFIIEASFLKNEKIIVAMKDAFETFINK
RPNKPAELLAKYVDSKLRTGNKEATDEELEELLAKVVILFRFIHEKDVFEAFYKKDLAKR
LLLDKSASVDAEKSMLCKLKQECGTAFTNKLQGMCKDMELSKDIMIQLKQYMKNQNIPGN
IDLTVNILTMSFWPAYIPKEIHLPPDMERLQKDFKNFYLSKHSGRKLQWQSTLGRCVLRA
EFKKGKKELQVTLFQTLVLLMFNEGNRFSLEEIKVATGVEDRELRRTLQSLACGRARVLI
KSPKGRDVEDGDVFFCNEEFKHKLFKIKINEIQMKETVEERTITTQRVFQDRRYQIDAAI
VRIMKIRKTLTHSVLLSELYKQLKFTLQPSDLKTRVESLIDRDYMERDKENPNKYKYIA
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgcctcagcaagactcatcatccttttcagctgctgctgcctctcagaaacaagagcaa
cttaaaaacgtaaagttggtagttttctctgtggctgcagaccgtcacaacaacgactgg
actgaagccccaacaactctgtctagttttgccagtaacacgcttggcactggctctgtc
aagaagttggtaatcaaaaactttaaagataaacccctgccactggaaaactacactgaa
gaaacatggcaaaagttaaaagaagctgtacaggctatccagaatagtatctctgttaaa
tacagcttggaagaactctatcagagtgttgaaaacctttgctcctacaatttatctgca
aacttgtataaacagttgaagcagctttgtgaacagcacctcaaagcacaaattcatcaa
ttcagagaggattctgtggacaatggcccttttctaaagaaaatggataaatgctggcaa
aatcatagcagacaaatgagcatgattaggaacatttttctgttcctagatagaacttat
gcttttcaatacttgatgttgtcttcaatttgggatatgggccttgaattattcaaatca
tatataatttgtgatcagaatgttcgtagcaggaccatagatggaattcttgtgttgatt
gagaaagaaagaaatggcgaaatggttgatcgatgtctgattcaaaggcttgtaactatg
ctttctgatttgcggatttaccaagaatcttttgagagtaaattcttagaagaaacaagc
aggttctatgcagcagagggaaggaagctagtgcaaaaaaaagagattcctgggtgtctt
taccacatcaagaagctcctagaaggagaagtagacagagttagaacctacctatgcctt
aacacacagaaacaactgatcactatgctagaaaagcagcttctaggtgaacacttatca
gcagttcttcagaaaggcttaaactttcttcttgatgaaaacagaattgaggatttgtct
ttagtctaccaactatttagtaggatagaatgtggatttcaagttcttctccagcattgg
attgagtatatcaagaaatttggtagcagcatagttattaaccctatgaaagataagaca
atggtgcaagagcttctggattttaaagataagatagattttatcattgaagcgtctttt
ctgaaaaatgagaaaattattgttgctatgaaagatgcttttgaaacatttattaataaa
agacctaacaaaccagctgagcttctagcaaagtatgtggattcaaaacttcgcacaggt
aacaaagaagctacggacgaagaacttgaagaattattagctaaagtggtaattttattt
aggtttattcatgagaaagatgtttttgaagccttctacaaaaaagatttagcaaaacgt
ctcttacttgataagagtgcttcagttgatgcagaaaagtcaatgctgtgcaaacttaaa
caagaatgtggaactgctttcactaataaacttcaaggaatgtgtaaagatatggagctt
tccaaagatatcatgattcagttaaaacagtatatgaagaaccaaaatataccaggaaac
attgatttaactgtgaacattctgacgatgagtttttggccagcctacatccctaaggag
atccacttacccccagatatggaaagacttcagaaagatttcaagaatttctacttaagc
aaacacagtggccggaaacttcagtggcagtccactcttggacgttgtgttcttagagct
gaatttaaaaagggcaaaaaagaacttcaggtaacccttttccaaacattggtgctgttg
atgtttaatgaaggaaatcggttcagcttagaagaaattaaggtggctactggagtagag
gatagagaacttagaagaactctacagtcattagcttgtggcagagctagagttcttatc
aaaagtcccaagggcagagatgtggaagatggtgatgtatttttttgtaatgaggaattc
aaacacaaactcttcaagataaagatcaatgaaatccagatgaaagaaacggtagaggaa
cgtaccatcaccacacagagagttttccaagatcgacgatatcagattgatgctgcaatt
gttcgcattatgaagataaggaaaacacttacccacagtgtacttctctcagaattgtat
aagcagctaaaatttacgctacagccttctgatctgaagacgagagtagaatctttaatt
gacagagactacatggaaagagataaagaaaatccaaacaagtacaagtatattgcatga

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