Lynx rufus (bobcat): 124525826
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Entry
124525826 CDS
T08475
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03083
Polycomb repressive complex
lruf04980
Cobalamin transport and metabolism
lruf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124525826
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
124525826
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124525826
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lruf01009
]
124525826
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124525826
03029 Mitochondrial biogenesis [BR:
lruf03029
]
124525826
Protein phosphatases and associated proteins [BR:
lruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124525826
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
124525826
HMT complexes
COMPASS/SET1 complex
124525826
MLL-HCF complex
124525826
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124525826
Mitochondrial biogenesis [BR:
lruf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124525826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
124525826
NCBI-ProteinID:
XP_046954364
LinkDB
All DBs
Position
Unknown
AA seq
2083 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATAASPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAPPTTTAIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGEVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGQPQPTQVQFVCDRQEAAASLVASTVGQQNGSVVRVCSNPPC
ETHETGTTHTATTATSNMAGQHGCSNPPCETHETGTTSTATTAVSSIGAGQQRDLRRACV
AGTAPAVVRVGMAAGVSEGAQGSVKASCQTRQTGVTGTAMTVLATGAPCSAGPLLGPALA
VEAGGRGATFVQLAAVSGQVRPSGPVAGLSQLASVGRQPEAHHTHTTNTPTTVRSAMGAG
EPGEARGTPTPAYESSASGAVTVTALEALLCPSATASQVCSDPPCETHDTGTTHTATTSN
AGSAQRVCSNPPCETHETGTTHTPTTATSNGGAGQPEGGQQPPAGRPCETHQTTSTGTTM
SVGVGALLPMESGLEVAAPPSIAPQAAASLLAPFPTQRVCSNPPCETHETGTTHTATTVT
SNMSSNQDPPPAASDQGDAESTQGDSVNITSSSAVTTTVSSTLTRAVTTVTQSTPVPGPS
VPKISSMTEATPGALTTEVPIPATITVTIANTETSDMPFSAVDILQPPEELQASPGPRQQ
LPPRQLLQPASTPLMGESAEVLSASQTPELQAAVDLSGTGDPSSGQEPASSAVVATVVVQ
PPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQAL
AIQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQATTIPIVLTQQELA
ALVQQQQQLQEAQAQQHHHLPTEALAPADSLNDPAIESNCLNELAAAVPSTVALLPSTAT
ESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPPPPSKAPVKKENQW
FDVGVIKGTNVMVTHYFLPPDDAVPSDDDSGAVPDYSQLKKQELQPGTAYKFRVAGVNAC
GRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSS
QAGGEPKSSAPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYG
PATQVRWLQETSKDSSGAKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgctaactctccagcggtgctcctgcagccccgctggaag
cgagtggtgggctggtcgggtccggtgccccggccccgccacggccaccgagccgtggcc
atcaaggaactcatcgtggtgtttggcggcggcaacgaggggatagtggacgaactgcac
gtgtacaacacggcgactaaccagtggttcatcccagccgtgagaggggacatcccccct
gggtgtgccgcgtatggcttcgtgtgtgacggcactcgcctgctggtgtttggtgggatg
gtggagtatgggaaatacagcaatgacctctacgagctccaggcaagccggtgggaatgg
aagagactcaaagcaaagacgcccaaaaatggaccccctccgtgtcctcggctcgggcac
agcttctccctcgtgggcaacaagtgctacctgtttgggggtctggccaacgatagcgag
gaccccaagaacaacattccgaggtacctgaatgacttatacatcctggaattgcggccg
ggctccggagtggtggcctgggacatccccatcacttatggcgttctgcctccaccccgg
gagtcccacactgctgtggtctatactgagaaagacaacaagaagtccaagctggtgatc
tatggagggatgagcggctgcaggctgggggacctttggaccttggatatcgagactctg
acgtggaacaagcccagtctcagcggggtagcgcctcttccccggagtcttcactcagcc
acgaccataggaaacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac
ctggataccatggcctgggagaccatcctgatggacacgctggaggacaatattccccgg
gcccgagccggccactgtgccgtagccatcaacacccgcctgtacatttggagtgggcgc
gacggctaccgaaaggcctggaacaaccaggtctgctgcaaggacctgtggtacctggag
acagaaaagccaccacccccggcccgggtacagctggtacgagccaacaccaattccctg
gaggtgagctggggggccgtggcgacagccgacagttaccttctgcagctccagaaatat
gacattcccgccacggccgctactgccgcctcccccacgcccaatccggtcccgtctgtg
cccgccaaccctcccaagagccccgccccggcagcagccgcacctgccgtgcagccgctg
acccaggtaggcatcacgctcctgccccaggctgctgccgcgcccccgaccaccaccgcc
atccaggtcttgccgacggtacccggcagctcaatctccgtgcccacggcggccaggact
caaggcgtccccgctgttctcaaagtcaccggtcctcaggccacgacaggaaccccgctg
gtcaccatgcgacctgccagccaggctgggaaagcccccgtcaccgtgacctcccttcct
gcaggcgtgcgaatggttgtgccgacgcagagtgcccagggcacggtgattggcagcagc
ccgcagatgagcggcatggccgcgctggcagctgcagctgccgccacccagaagatcccg
ccctcgtcagcgcccacggtgctgagtgtcccagcaggcacgaccatcgtcaaaaccgtg
gctgtgacgccaggcaccaccaccctcccggctaccgtaaaggtggcctcctcgccggtc
atggtgagcaacccggccactcggatgctgaagactgcggccgcccaggtggggacgtct
gtctcctctgctgccaatacatccacccgccccatcatcacggtgcataagtcgggaact
gtgacagtggcccagcaagcccaggtggtgaccacggtggtgggtggagtcaccaagacc
atcaccctggtgaagagccccatctctgtcccaggaggcagtgctctgatttccaacctg
ggcaaggtgatgtcagtggttcagaccaaacccgttcagacttcagcggtcacaggccag
gcatctacgggcccggtgactcagatcatccagaccaaagggcccctgccggccgggacc
atcctgaagctggtaacctccgcggacggcaagcccaccaccatcatcactaccacgcag
gccagcggggccgggactaagcccaccatcctgggcatcagcagcgtgtccccgagcacc
accaagccgggcacgaccaccatcatcaagaccatccccatgtcggccatcatcacgcag
gccggcgccacaggtgtgaccagcagtccgggcatcaagtcccccatcaccattatcacc
accaaggtgatgacttcaggaaccggagcgcctgccaaaatcatcacagctgtccctaag
atcgccactggccacgggcagcaaggagtgacccaggtggtgctaaagggggcccccgga
cagccgggcaccatcctccgcaccgtgcccatggggggtgtccgcctggtcacccccgtc
accgtctctgccgtcaagccagcagtcaccacgttggttgtgaagggcaccacaggcgtc
acgaccctgggcacagtgacaggcaccgtctccaccagccttgccggagctgggggccac
agtaccagcgcctccctggccacgcccatcaccacgttgggcaccatcgccaccctctcg
agccaagtgatcaaccccaccgccatcaccgtgtcggctgcgcagaccacgctgacggcg
gccggcgggctcaccacccccaccatcaccatgcagcctgtctcccagcctacccaggtg
acgctcatcacggcgcccagtggagtcgaggcccagcccgtgcatgacctccctgtgtcc
attctggcctcgcccaccacagaacagcccacggccacggtcaccatcgccgattcaggc
cagggtgaggtgcagccgggcaccgtgacgctggtctgctccaacccgccctgcgagacc
cacgagacgggcaccaccaacacagccaccaccaccgtcgtggctaacctcggggggcag
ccgcagcccacccaagtgcagttcgtctgtgacagacaggaggcggccgcttctctcgtg
gcctcgacggtggggcagcagaacggcagcgtggttcgcgtctgctccaacccgccgtgc
gagacccacgagacgggcaccacccacacggccaccaccgccacgtccaacatggctggg
cagcacggctgctccaacccgccgtgcgagacccacgagaccggcaccaccagcaccgcc
accaccgctgtgtcgagcatcggcgccggccagcagcgagacctccgccgtgcctgcgtg
gccggcaccgctcctgccgtggtccgggtcggcatggccgccggggtgtcggagggagcc
cagggctccgtcaaggcctcgtgccaaacccgccagaccggcgtgaccggtaccgccatg
actgtgctggccaccggggccccatgctcggccggcccgctccttgggccggccttggcg
gtggaggccggcggccgcggcgccaccttcgtgcagctggccgccgtgagtggccaggtc
agacccagcggccccgtggccggcttgagtcagctggcgtccgtggggcgccagccggag
gctcatcacacccacacgaccaacacccccaccacggtccgctccgccatgggtgccgga
gagcccggcgaggcacgggggacccccacacccgcgtacgagagctcggccagtggcgcc
gtgactgtgacggccctggaggcgctgctgtgcccctcggccaccgcgagccaagtctgc
tccgacccgccgtgcgagacccatgacacgggcaccacccacaccgccactacctcgaat
gccggcagcgcccagcgggtctgctccaacccgccctgcgagacccacgagacgggcacc
acccacacgcccaccacggccacgtccaacgggggtgcgggccagcctgagggcgggcag
cagccccctgccggccgcccctgcgagacacaccagaccacgtccaccggtaccaccatg
tcggtcggtgtgggcgccttgctccccatggagtccggcttggaggtggcggcgcctccc
tccatcgccccccaggctgctgcttcgttgctggctcctttcccgacgcagagggtgtgc
tccaaccccccttgtgagacgcacgagacgggcaccacacacacggccaccaccgtcacc
tcgaacatgagctcaaaccaagatcccccaccagccgccagtgaccagggagacgcggag
agcacccagggcgacagcgtgaacatcaccagctccagtgccgttacgacaaccgtgtcc
tccacactgacgagggctgtgaccactgtgacacagtccaccccggtcccgggcccctcg
gtaccgaagatctcatcaatgactgaggctaccccaggggctctgaccaccgaagtcccc
atcccagccacgataacagtgaccatagccaacacagaaacttctgacatgcccttctct
gctgttgacatcctgcagcccccagaggaactccaggcctcgccagggccccgccagcag
cttccgccacggcagctcctgcaaccggcctccacgcccctgatgggggagtccgccgag
gtcctgtcagcctcccagacccctgagctccaagccgccgtggatctgagcggtacaggg
gacccgtcttcgggccaggagcccgccagctccgccgtggtggccactgtggtggtccag
ccgcccccgcctacgcagtctgaagtagaccagctgtcgcttcctcaggagctgatggcc
gaggcccaggcaggcaccaccaccctcatggtgacggggctcacccccgaggagctggcg
gtcaccgctgccgctgaagcagccgcccaggctgcagccaccgaggaggcccaggccctg
gccatccaggcggtgctccaggctgcgcagcaggccgtcatggcaggcaccggggagccc
atggacacgtctgaggcggcggcggccgtgacgcaggccgagctgggccacctgtccgcc
gagggccaggagggccaggccaccaccatccccatcgtgctgacgcagcaggagctggcc
gctctggtgcagcaacagcagcagctgcaggaggcacaggcccagcagcaccaccacctg
cccaccgaggccctggcgcctgccgacagcctcaacgacccggccatcgagagcaactgc
ctcaatgagctggccgccgccgtccccagcaccgtggccctgctgccctccacagccact
gagagcctggctccgtccaacacgtttgtggccccccagccggtcgtggtagccagccct
gccaaactacaggccgcggcgaccctgactgaagtggccaacggcatcgagtccctgggc
gtgaagccagacttaccgcccccgcccagcaaagcccccgtgaagaaggagaaccagtgg
ttcgacgtgggcgtcattaagggtaccaacgtaatggtgacacactatttcctgccacca
gacgatgccgtcccgtccgacgatgactcgggcgccgtccccgactacagccagctgaag
aaacaggagctgcagccgggcacggcctacaagttccgtgtcgctggggtcaacgcctgc
ggccgggggcccttcagcgagatctctgctttcaagacgtgtctgcccggcttcccgggg
gctccctgtgccattaaaatcagcaaaagtccagatggtgctcacctcacctgggagccg
ccgtccgtgacgtccggcaagatcatcgagtactcggtgtacctggccatccagagctcg
caggccggtggcgagcccaagagctccgccccggcccagctggccttcatgcgggtgtac
tgcgggcccagcccctcctgcttggtgcagtcgtccagcctctccaacgcccacattgac
tacaccaccaagcccgccatcatcttccgcatcgccgcccgcaacgagaagggctacggc
cctgccacccaagtcaggtggctgcaagaaaccagtaaagacagctccggcgccaagcca
gccagcaagcggcccatgtcctctccggaaatgaaatccgctccaaagaaatctaaggca
gatggtcagtga
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integrated database retrieval system
