Lynx rufus (bobcat): 124526178
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Entry
124526178 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
124526178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124526178
04121 Ubiquitin system [BR:
lruf04121
]
124526178
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124526178
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124526178
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124526178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-B_box_Trim66
zf-RING_UBOX
COG5_N
Motif
Other DBs
NCBI-GeneID:
124526178
NCBI-ProteinID:
XP_046954926
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSGSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLS
NLLDAVVATADEPQPKNGRAGAPAGAGGHSNHRHHAHHAHPRAPASAPPPLPPAPPPPAP
PRSAPGAPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDH
YIERGPPGPAAAAAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDT
CSVPICRECTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQ
VEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQSLNKLE
STISAVQQVLEEGRALDVLLARDRMLAQVQELKTVRGFLQPQEDDRVMFTPPDQALYLAI
KSFGFVSSGAFAPLTKATGDGLKRALQGKVASFTVVGYDHDGEPRLSGGDLMSAVVLGPD
GNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLP
GLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQ
FDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNAEG
KILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLL
VIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFG
AQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccggctcgtccgcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcgggcggcggcggcgggggcccgggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggccggcggc
ggcggcggcggcgcgcccggggagcccctcaagctgcgctgccccgtgtgcgaccagaaa
gtcgtgctggccgaggcggcgggcatggacgcgctgccctcgtccgccttcctcctcagc
aacctgctcgacgccgtggtggccacggccgacgagccgcagcccaagaacgggcgcgcc
ggggccccggcgggcgcgggcggccacagcaaccaccggcaccacgcgcaccacgcgcac
ccgcgcgcgcccgcctcggccccgccgccgctcccgcccgcgccgccgccgcccgcgccg
ccccgctccgcgcccggcgccccggccgcctccccgtccgcgctgctgctgcgccggccg
cacggctgcagctcgtgcgacgagggcaacgcggcctcgtcgcgctgcctggactgccag
gagcacctgtgcgacaactgcgtccgcgcgcaccagcgcgtgcgcctcaccaaggaccac
tacatcgagcgcggcccgccgggtcccgccgccgccgccgccgccgccgctgccgcgcag
cagctcgggctcgggccgcccttccccggcgcgcccttctccatcctgtccgtgtttccg
gagcgcctgggcttctgccagcaccacgacgacgaggtgttgcacctgtactgtgacacc
tgctcagtgcccatctgtcgtgagtgcacgatgggccggcacggcggccacagcttcatc
tacctccaggaggcgctgcaggactccagggcacttaccatccagctgctggccgacgca
cagcagggccgccaggccatccagctgagcatcgagcaggcccagacggtggcggaacag
gtggagatgaaggccaaggtggtacagtcggaggtcaaagctgtgactgcgcggcacaag
aaggccctggaggaacgggagtgtgagctgctgtggaaggtggagaagatccgccaggtg
aaagccaagtccctgtacctgcaggtggagaagctgcgacagagcctcaacaagctggag
agcaccatcagcgccgtgcagcaggtcctggaggaggggcgggcgctggacgtcctgctg
gcccgggaccgcatgctggcccaggtgcaggagctgaagaccgtgcgcggcttcctgcag
ccccaggaggacgaccgggtcatgttcacgccccccgaccaggccctgtacctggccatc
aagtccttcggcttcgtcagcagcggggccttcgcgcccctcaccaaggccacgggcgac
ggcctcaagagggcgctccagggcaaggtggcctccttcaccgtcgtcggctacgaccac
gacggggagcctcgcctctcggggggcgacctgatgtcggccgtggtcctgggccccgac
ggcaacctgttcggtgccgaggtgagcgaccagcagaacgggacgtacgtggtgagctac
cggccgcagctggagggcgagcacctcgtgtcggtcaccatgtgcaaccagcacatcgag
aacagccccttcaaggtggtggtcaagtcaggccgcagctacgtgggcatcgggctcccg
ggcctgagcttcggcagcgagggcgacggcgacggcaagctgtgccgcccctggggcgtg
agcgtggacaaggagggctacatcgtcgtggccgaccgcagcaacaaccgcatccaggtg
ttcaagccgtgcggggccttccaccacaagttcggcaccctgggctcccggcccgggcag
ttcgaccggccggccggcgtggcctgcgacgcctcccgcaggatcgtggtggccgacaag
gacaatcatcgcattcaggtcttcacgttcgagggccagttcctgctcaagttcggcgag
aagggaaccaagaacgggcagttcaactacccttgggacgtggcggtgaacgcggagggc
aagatcctggtctcagacacccggaaccaccggatccagctgttcgggcccgacggcgtc
ttcctgaataagtacggcttcgagggggctctctggaagcactttgactccccccggggc
gtggccttcaaccacgagggccacttggtggtgaccgacttcaacaaccaccggctcctg
gtcatccaccccgactgccagtccgcgcgcttcctgggctccgagggcacgggcaacggg
cagttcctgcgcccgcagggtgtggccgtggaccaggaggggcgcatcatcgtggccgac
tccaggaaccaccgggtgcagatgttcgagtccaacggcagcttcctgtgcaagtttggc
gcccagggcagcggcttcgggcagatggaccgcccctccggcatcgccgtcacccccgac
gggatgatcgtggtggtggactttggcaacaatcggatcctcatcttctaa
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integrated database retrieval system
