Lynx rufus (bobcat): 124526422
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Entry
124526422 CDS
T08475
Name
(RefSeq) sodium channel protein type 11 subunit alpha-like
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124526422
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124526422
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
124526422
NCBI-ProteinID:
XP_046955368
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MKMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTPAEPQPRPQLDLKV
SRKLPKLYGNIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSANRALFIFGPFNPI
RSLAIRISVHSLFSMFIICTVIINCVFMATACGKDNSNIYTDNAEYVFTGIYIFEALIKI
LARGFVLDEFSFLRDPWNWLDSIVIATAFVSYSPSIRASGISLSSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFKENLNQRCVRKDCKDMDNLD
DHCFEKKDSTEFRICGSWMGESACSEQFQCNHTKRNPDYNYTNFDNFGWSFLSMFRLITQ
DSWEKLYQQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKE
KMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNRKRKSFFLRDSGKDQ
PPESDSDEDSTKKPHILEQTKRLSQNLSVDFCDEHGDPFQRQRALSAVSILTITMQEQEK
SQEPCLPCGGNVASRYLVWNCSPQWLCVKKALRVVMTDPFTELVITICIVINTVFLALEH
YKMDQSFEYMLYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMN
SVVVGKQSPLFFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSV
VGMQLFGSKFNSVRNNTKSCGPTVPCLRRWHMGDFYRSFLVVFRILCGEWIENMWECMQE
TSKPLCVVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGSLDGEAKKTKVQLALDRFHR
AFCFVIHTLARFCHTWCRRQTLPQQKEVSGGPPAKSKDIIPLAAGVKRGLETWEEFGVVT
SAPKTLSVEHDRTWLAPLAEEEDDFESSGKINAQCVAPPEASKQAYELPQETKTSTSPGA
QSVEIDVFSEGDIYLSAQNPRKKSDTTSVFSECSTIDPQDPFARVPEMVPKKEPERCFPK
GLGHCFPCCATDKRKSHWIIWWNLRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLE
KRPNIQALLNCTDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLK
SLKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFS
GKFGRCINASDTNSVINYSVVANQSQCESGNFSWVTPPVNFDNVGMAYLALLQVATFKGW
MDIMYAAVDSRGKELQPGFEENPQNYLFFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKIS
GEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLAFDLVTNQVFDVIIIILIFLN
MVIMMAESNNHPEDTKAILEDLNLAFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVVL
SIVSAMVSALENQQHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFN
IGLLLFLVMFIYAIFGMNCFCKVKEGFGIDDLFNFKTFVGSILCLFQITTSAGWDALLRP
MLQSNDSCNPNLDSRHLPAIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLG
EDDFEIFYEVWEKFDPEATQFIKYPALSDFADALPEPLRVAKPNRFQFLMMDLPMVSGDR
LHCLDILFAFTTRVLGDSSGLDSMKAMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAV
IQKAFRKYKLKMSMCALEDGPRSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgacaggtgctacccggtgatctttccagatgaacgaaatttccgtccc
ttcacttcggacaccctggctacaattgagaagcggattgccatccaaaaggagaaaaag
aagtgcaaagaccagacaccagcagaaccccagcctcggcctcagcttgacctaaaggtc
tccaggaagttgcccaaactctatggcaacattccccatgagctgatagcaaggcccctg
gaagacttggacccgttctacagaaatcataagacgtttatggtgttgaacaaaaagagg
accatctatcgcttcagtgccaatcgtgccttgttcatatttgggcctttcaatccaatc
cgaagtttagccattaggatctcagtccattcattgttcagcatgttcatcatctgcacc
gtcatcatcaactgcgtgttcatggccaccgcctgtgggaaggacaacagcaacatatat
accgacaatgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttgttctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattgcaacagcgtttgtatcatactcaccaagtatcagggccagtggc
atcagtctgtcgtccctacgtaccttccgggtgttcagagctttgaaagcaatttcggtg
gtttcaggtctgaaggtcatcgttggggccttgctgcgctctgtgaagaagcttgttgac
gtgatgatcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttt
aaggaaaatctgaaccagagatgtgtcaggaaggactgtaaggatatggataaccttgac
gaccattgctttgaaaagaaagattccactgaattcagaatatgtggcagctggatgggt
gaaagtgcctgttctgaacaatttcagtgcaaccacaccaaaaggaatcctgactataat
tataccaattttgacaactttggctggtcttttctgtccatgtttcggctgataacccaa
gattcctgggagaagctttatcaacagaccttgcgtacctcagggcttttctcagtcttc
ttcttcgtggtggtcatcttcctgggctccttctacctgattaacttaaccctggctgtt
gtcaccatggcttacgaggagcagaacagaaacgtagctgccgagaccgaggccaaggag
aagatgttccaggaagcccagcggctgctgaaggaggaaaaggaggctctggttgccatg
ggaattgacagaagttcacttaattcccttgaggcatcatctttttccccaaagaagaga
aagctatttggtaataggaaacgaaagtccttttttttgagagactctgggaaagaccag
cctccagaatcagattctgatgaagattccacgaaaaagccacacatcctagagcaaacc
aaacggctgtcccagaatctgtcagtggatttctgtgatgagcacggggaccccttccaa
aggcagagggccctgagtgctgtcagcatcctcaccatcaccatgcaggagcaagagaaa
tcacaggagccttgcctcccgtgtgggggaaacgtggcgtccagatacctcgtgtggaac
tgcagcccccagtggctgtgcgttaagaaggccctgcgagtcgtgatgaccgaccccttt
actgagctggtcatcaccatctgcatcgtaatcaacactgtcttcttggccttggagcat
tacaaaatggaccagagttttgagtatatgttgtatacagggaatttggttttcactggc
attttcatggcagagatgtgcctaaaaatcatcgcgctcgatccctacaactacttccgc
cgaggctggaacatttttgacagcatcgtcgctcttctgagttttgcagatgtgatgaac
agtgtagttgtaggaaaacaaagtcctctgtttttccattccttaagagtgctaagggtt
ttcaagttagccaaatcctggccgactttaaacacactgataaagataattggccactcc
gtcggagccctgggaaacctgaccgtggtcctggccattgtggtcttcattttctcagta
gttggcatgcagctttttggctctaaattcaattctgtaaggaataacaccaaatcctgt
ggccctacagtcccatgtttacgacgctggcacatgggggacttctaccgttcctttctg
gtggtattccgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatgcaagaa
actagtaaaccactgtgcgtcgtcgtctttctgttgatcatggtgataggaaaactcgtg
gtactcaacctcttcattgccttgctgctcaattccttcagtaatgaggagagggatgga
agcttggatggagaggccaaaaaaaccaaagtccagttagccctggatcggttccaccgg
gctttttgctttgtaatccatactcttgcgcgtttttgtcacacgtggtgcaggaggcaa
acgttaccgcagcaaaaagaggtgtcgggaggccctcctgccaaaagcaaagacatcatt
ccactggccgcaggggtgaaaaggggcttggagacctgggaggagttcggtgtagtcacg
tctgcaccaaagaccttgagtgtggagcatgaccggacttggttggccccacttgcagag
gaggaggatgattttgaatcttcaggcaaaatcaatgcacagtgcgttgcaccacctgag
gctagcaaacaggcctatgaactccctcaggagaccaagacgtctaccagcccaggagct
caaagtgtggaaattgatgtgttctctgaaggtgacatttatctgtcagcacagaacccc
cgaaagaagtctgatactaccagtgttttctcagaatgtagcaccattgatccacaggat
ccttttgcaagggtaccggaaatggttcccaaaaaagaaccagagagatgttttcccaaa
ggcctgggtcactgcttcccatgctgtgccacggacaagagaaagtcccactggatcatt
tggtggaacctgcggaaaacctgctaccaaatagtgaaacacagttggtttgagagcttt
gttatctttgtgattctgctgagcagtggggcactggtatttgaagatattcaccttgag
aaacgacccaatatccaagcattacttaattgtactgaccatattttcacatacattttt
atcctggagatgggtctaaaatgggtagcctttggatttgggaagtatttcaccagtgtc
tggtgctggcttgacttcatcattgtaattgtctctgtgaccagtctcatcgacctaaag
agcttgaagtccttcaggactctacgagcactgaggcccctgcgcgcactgtcccagttt
gaaggaatgaaggtggtcgtcaatgctctcataggtgccatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtatcctgggagtaaacttcttctct
ggaaaatttggaagatgcattaacgcatcagatacaaactcagttataaattacagcgtt
gttgcaaaccaaagtcaatgcgaaagtggaaatttctcttgggtcaccccgccggtcaac
tttgacaatgtgggaatggcctaccttgccctcttgcaagtggcaacatttaagggctgg
atggatatcatgtatgcagctgtcgactccagagggaaagaactacagccagggtttgag
gagaacccacaaaactaccttttcttcgtggtttttatcatctttggctcattctttact
ctgaatctcttcatcggtgttattattgacaacttcaaccaacagcagaaaaagataagt
ggtgaagatatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaatta
ggatccaaaaaacctcaaaagcccattccgaggcctctgaataaatgccagggtctcgcg
ttcgacctggtcacaaaccaggtctttgacgtcatcatcatcatcctcattttcctcaac
atggttatcatgatggctgaatcaaataaccatcccgaagacacaaaagccatccttgag
gatctcaacctggcctttgtggtcatctttacaattgagtgtctcatcaaaatctttgct
ttgaggcaatactacttcaccaatggctggaacttattcgactgtgtgatcgtggttctc
tctattgttagtgccatggtttctgccttggagaaccagcagcacattcccttccctcca
acgctcttcagagttgtgcgcttggctcggattggtcggatcctgagacttgttcgggca
gcacgaggaattagaaccctcctttttgctctgatgatgtcccttccctctctattcaac
atcggtcttctgctttttctggttatgtttatctatgccatttttggtatgaactgcttt
tgcaaagtgaaggaagggtttggaattgatgacctattcaacttcaagacttttgttggc
agcatactctgtctcttccagatcaccacctcggcaggctgggatgccctcctcaggccc
atgctgcaatcaaatgattcatgcaaccccaacttagacagccgtcacctccctgccata
gccatagcctactttgttagttacatcatcatttccttcctcattgttgtcaacatgtac
attgctgtgatcttagagaacttcaatactgccactgaagaaagcgaggaccctttgggt
gaagatgactttgaaatattctatgaagtctgggaaaagtttgacccagaggcaacacag
tttatcaagtatcccgccctttctgactttgccgatgcccttcctgagcctttacgggtg
gcaaagccaaacagatttcagttcctaatgatggacttgcccatggtgagtggagatcgc
ctccactgcctggatatcctcttcgcgttcaccactagggtacttggtgactccagcggc
ctggacagcatgaaagcaatgatggaggagaagttcatggaggccaacccttccaagaag
ttgtacgaacccatagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgtt
attcaaaaggcctttcgaaaatacaagctgaagatgtccatgtgtgccttagaagacggg
cctcgttcaccactccagacactctgcaacggagacctctccagctccggggtggccgag
ggcaaggtccactacgactga
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integrated database retrieval system
