Lynx rufus (bobcat): 124526647
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Entry
124526647 CDS
T08475
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lruf00536
]
124526647
Glycosaminoglycan binding proteins [BR:
lruf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
124526647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
124526647
NCBI-ProteinID:
XP_046955699
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MIMFPHFGKISLGILIFVVIEGNLPSLTAQTYISLEDIQEPKSAVSFRLTDKESGEPSHS
TEKKLPLDHREAEKQWLLRRRRSILFPNGVKTCPDESITEAVAKHVKYFKVRVCQEAVWE
AFRTFWDRLPGREEYRYWMNLCEDGNTTIFEMGTNFSQSVEHRNLIMKKMTYTKETVSSP
ELSSPVPVGDAPTSGGAVVSVPYPGVTTSEGISESSKERPGESISNEIENVMEETTKPAT
EQIAEFSIHLLGEQYREELQDPSNFQHQHLVEEFISEVENAFTGLPGYKDIRVLDFRSPK
ENGSGLDVHYAVTFNGEAISNTTWDLISLHSNKVENHGLVGLDDKPTAVYAISNFRDYIA
ETLHQNFLLGNSSLNPDPDSLRLINVRGVLLPETEDLVWNTQSSSLQATLPSILDNTLQA
EWPSADESTTSSISPLDFTSGPPSTNGRELWSESPLGDLVSTPELAFPAKVGLSSSPEVL
EVSSLTLHSVTPAVLQTGLPVVSKEGTSGSHILEDGLIKFEGPEDILSVHSLPSSPFTHP
VPKETISSVEDSEVSLTSSPYLASSVTLDLAKETMIPFGLDSLASKVKGQLEVSTLMPDT
SIEKEFIFESGLGSGSGQKVDLITWPWSETSLEKSSEPLSKSWLEDQESLMPTEGIDEKL
GIDDKDSTGQSTEHLKYGYYDRSTHFAEEELIGGPTVPIFAETTTESASLILSKQISEAP
DIDDYSVTKAPLLLTAIAISASTGKPELPFLKKDMEQTIESSDREWFDSKVSIMKPDMQP
LGTILPESDVVWARTSSLGKLSRDILATTLQSTDKLWLKSSMTQSTKLSPTTSSTLLEDE
VIMGVQDISLELDRIGTDYYQPEVIPEENGKVGSYVEMSTNVQSTERAIVVQPTEGGDLS
HTQTAGALVVFFSLRVTNMMFSEDLFNKNSLEYRALEQRFLELLVPYLQSNLTGFQNLEI
LNFRNGSIVVNSRMKFAKSVPPNVNNAVYMILEDFCTTAYQTMNLAIDKYSLDVESGDQA
NPCKFQACNEFSECLVNPWSGEAECRCHPGYLSVEELPCQSLCDLQPDFCLNDGKCDIMP
GHGAFCRCRVGENWWYRGEHCEEFVSEPLVIGITIASVVGLVLVSSAVVFFLVRTLQTRH
VRRERERLSSRQPDSLSSIENAVKYPAYESHVAGPEQYEGPYPHNPFYSSASGEMIGGLS
REEIRQMYENSELSKEEIQERMRILELYANDPEFVAFVREHQMEEL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtttcctcattttgggaagatttctctgggtattttgatatttgtcgtgata
gaaggaaaccttccatcattaacagcacaaacctacatatctttagaagatatccaagaa
cccaagagtgcagtttcttttcgcctgactgacaaggaatccggggagccttctcattct
actgaaaagaaactacctttggaccacagagaagctgagaaacagtggttgctcagaaga
aggcgatctatcctgtttcctaatggtgtaaaaacctgcccagatgaaagcattacagag
gctgtggcaaagcatgtaaagtactttaaagtacgagtgtgtcaggaagctgtctgggaa
gccttccggacattttgggatcgacttcctggacgtgaggaatatcgttactggatgaat
ttgtgtgaggatggaaacacaactatatttgaaatgggcacaaattttagtcagtctgtg
gaacatagaaatttaattatgaagaaaatgacatatacaaaggaaactgtaagcagccct
gaattgtcatctccagttcctgttggtgatgccccaacatcaggaggtgctgttgtcagt
gttccatatccaggggtgaccacctctgaaggtatctcagagagcagcaaggagaggcct
ggggagagtattagtaatgaaattgagaatgtcatggaagaaaccacaaaaccagcaact
gagcagattgcagagtttagtatccaccttttgggagagcaatatagggaagaactacag
gatccctccaactttcagcaccagcaccttgtagaagagtttatttcagaggttgaaaat
gcatttactgggttaccaggctataaggacatccgtgtacttgactttaggtcccccaag
gaaaatggcagtggtttagatgttcactatgcagtgaccttcaatggtgaggccatcagc
aataccacctgggacctaattagccttcattccaacaaggtggaaaaccatggtcttgtg
ggactggatgataagcccactgctgtttatgcaattagtaacttcagagattatattgct
gagacactgcaccagaattttttgttggggaattcctctttgaatccagatcctgactcc
ctccggcttatcaatgtgagaggggttttacttcctgaaactgaagacctagtttggaac
acccaaagttcaagtcttcaggcaaccctaccatccattttggataatacccttcaagct
gaatggccctcagcagatgaatccaccaccagcagtatttcaccacttgatttcacctct
ggtcctccctcaaccaatggcagggaactctggtcagaaagccctttgggtgatttagtg
tctacacccgaattagcctttcccgcgaaggtgggcctcagttcttccccagaggtttta
gaggttagcagcttgactcttcattctgtcaccccagcagtgcttcagactggcttgcct
gtggtttctaaggaaggaacttctggatctcacatattagaagatggattaatcaaattt
gaagggccagaagatattctttctgttcattcattgccttcaagtccattcactcatcca
gtgccaaaggaaacgatatcatctgtggaagactctgaagtgtctttgacatcctcacca
tatctggcctcctctgtcactttggatcttgctaaagaaacaatgataccttttggcttg
gactctttggcctccaaagtcaaaggccaattagaagtgagcactttgatgccagacaca
tccatagaaaaagagtttatatttgagagtggtttaggttcaggatctgggcaaaaggtg
gatctgattacttggccatggagtgagacttcattagagaagagttctgaaccactgtct
aagtcatggcttgaagatcaggaatcacttatgccaactgaaggtatagatgagaaatta
ggtatagatgacaaagattccacagggcaaagtactgagcatttaaaatatggatattat
gatagatccacacactttgcagaggaagagctcattggtggacctactgtgcccatcttt
gcagagaccacaactgaatctgcatctctaattctctccaagcaaatatcagaggcacct
gacattgatgattactcagttaccaaagcacctcttctattgacagctatagcaatctct
gcttctactggtaaaccagagctaccatttctaaagaaggatatggaacaaactatagag
tcatccgaccgtgaatggtttgacagcaaggtttcaataatgaagccagatatgcaacct
ttggggaccatattgccagaatcagatgtagtttgggcaagaacttcttccctggggaaa
ttgtccagagacatattggcaactacactgcagagtactgacaagctctggctgaaatct
tccatgacacagtctaccaaattgtctccaaccacaagctccaccctgctagaggatgaa
gtaattatgggtgtacaggatatttcattagaactggaccggataggcacagattactat
cagcctgaggtaatccctgaggaaaatggcaaggttggtagttatgtggaaatgtctaca
aatgttcagtccacagagagggctattgtggtgcaacccacagaaggaggtgacttgagt
catacccagactgcaggagctttggtggttttcttcagcctccgagtgacaaacatgatg
ttttcggaagacctatttaataaaaactctttggagtatagagcactggagcaaagattt
ttggaactgctggttccctacctccagtcaaatctcacagggttccagaatttagaaatc
ctgaactttagaaatggcagtattgtggtgaacagccgaatgaagtttgccaagtctgtc
cctcctaatgtcaacaatgctgtatacatgattctggaagacttctgtaccacggcctac
cagaccatgaacttggctattgataaatactccctcgatgtggaatcaggtgatcaagcc
aacccttgcaagtttcaggcatgcaatgaattttctgaatgtttagtcaacccctggagt
ggagaagcagagtgcagatgccaccctgggtacctgagtgtggaagaactgccctgtcag
agtctctgtgacctacagcctgacttctgcttgaatgatggaaagtgtgacattatgcct
ggacatggggccttttgtagatgccgggtgggtgagaactggtggtaccgaggtgagcac
tgtgaggagtttgtgtctgagcccctggtaataggcatcaccattgcctctgtggttgga
cttgtcctcgtttcgtctgctgttgtcttcttcctcgtcaggactcttcagactcgtcat
gttaggagagagagagagaggctcagcagcaggcagcctgacagcctctcatcaattgaa
aatgctgtgaagtaccctgcatatgaaagccatgtggctggacccgagcagtatgagggg
ccctatcctcacaaccccttctacagctctgcaagtggagagatgattggtggtctgagc
agggaagaaatcaggcaaatgtatgagaacagtgagctttccaaagaggaaattcaagaa
agaatgagaattttggaactgtatgccaatgatcctgagtttgtagctttcgtgagagaa
catcaaatggaagagctttaa
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integrated database retrieval system
