Lynx rufus (bobcat): 124526673
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Entry
124526673 CDS
T08475
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf00562
Inositol phosphate metabolism
lruf01100
Metabolic pathways
lruf04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
124526673
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
124526673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124526673
Enzymes [BR:
lruf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
124526673
Membrane trafficking [BR:
lruf04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
124526673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
124526673
NCBI-ProteinID:
XP_046955741
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRISEVR
KVLNSGNFYFAWSASGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKSLYGKQIIVN
LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFVD
YGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTR
FLEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCV
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNA
GNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLLHTTSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGR
MLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGK
VTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDGSKI
LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVL
VSIKSSVPENNFFDDALIDELLQQFTDFGEVILIRFVEDKMWVTFLEGSSALSVLNLNGK
ELLGRTITITLKSPDWIKNLEEEMSLEKINVPLPSSTSSTLLGEDAEVTADFDMEGDVDD
YSAEVEEILPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPG
HPSSQSSPMDALPATQLQQKDSQTLEPKRPPPPRPVAPPTRPAPPQRPPPPSAPKSPGTT
RKENIGRTQPSPQAGLPGPGPAGYSAARPTIPPRAGVISAPQSHARASAGRLAPESQSRP
PEGLKGSVLLPEPLKPQAAPPVQPSLPPPVQKMQEPLVPVAAPLPQSAPQPSLETPPQPP
PRSRSSHSLPPEPSPQPPQPQVKTNGVSAVRLESPLKNDPFEDLSFSLLAVSKAQSSIQT
SCAPTPNPKGLIQLPSATQSNMNTLSSVTCMPPIPARSKSQENMRCSPNPFITSLTSTNP
FTDRTAAPGNPFRAESQESEATSWVSKDEPVASSPFPSLKPLGHNNSKPSSFDGFKDSFD
LQGQSSAKISNPKGWVTFEEEEDFGVKGKSKSSCPDLLNNQPSSLSGSVTFDDDWNKGTN
VPFCVLPSRRPPPPPVTLPPPATTPLVAPFTTLPSKASPTLDFTER
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagcaaaggatttcggatctatcacaaactggatcctccacctttcagtctc
atcgtggaaaccaggcataaggaagaatgtctcatgttcgagtctggggccgtagctgtg
ctttcatctgcagaaaaagaggcaatcaagggtacatactccaaagtgcttgatgcttat
ggactcttaggtgttttacgattaaatcttggtgataccatgttacattatctggtccta
gtcactggatgtatgtctgttggaaaaattcaagaatcggaggttttccgagttacttcc
accgaatttatatcactacgaattgattcttcagatgaggatcgcatttcagaagtgcga
aaagttttgaattcgggaaacttttattttgcgtggtctgcatctggagtcagtttagat
ctgagtcttaacgcacatcgtagcatgcaagaacacacaaccgataatagatttttctgg
aatcagtctttgcacttgcacctcaagcactacggcgtgaattgtgatgactggctatta
cgcctcatgtgtgggggagtagaaatcagaacgatctatgctgctcataagcaggccaag
gcttgcctcatttccagactcagctgtgaacgagctgggaccaggtttaatgtccgggga
acaaatgatgacggccacgttgctaattttgtagaaacagaacaggttgtgtacttagat
gactctgtttcttctttcatccaaatccgggggtctgttccattgttctgggagcaacca
gggttgcaggtgggatctcatcgtgttcgtatgtcaaggggatttgaagccaatgcacct
gcttttgacaggcattttagaacgcttaaaagcttatatggtaaacaaataatagtaaat
ttgcttggatctaaggaaggtgaacatatgctaagtaaggctttccagagtcatttgaaa
gcttctgaacatgctgctgacatccagatggtgaattttgactatcatcaaatggttaaa
ggaggaaaggcagaaaaattacatagtgttcttaaacctcaagtccaaaagtttgtagat
tatggatttttttatttcaatggaagtgaagttcaaagatgccagagtggcacagttcga
acaaactgcttggattgtctggatagaacaaatagtgtgcaggcattccttggcttagag
atgctagctaaacaattggaagctcttggcttagccgaaaagcctcagctggtgactcgc
tttctggaagttttccggtcaatgtggtccgtgaatggtgattcgatcagtaagatatac
gcgggcactggagccctcgaaggaaaggcgaaggctggaaagttaaaagatggtgctcgt
tctgttactagaacgattcagaataacttctttgacagctccaagcaagaggccatagat
gttttactactgggaaatactctaaatagtgacttagctgacaaagctcgagcactttta
actaccggaagtttgcgcgtttctgaacagacattacagtcagcatcttccaaagtacta
aagagcatgtgtgagaatttctacaagtattcaaagcccaagaaaattcgggtatgtgtt
ggaacctggaacgtgaatggtgggaagcagtttcgcagcatagcttttaagaatcagacg
ctcaccgactggcttcttgacgcgcccaagttagctggcatccaggagtttcaagataaa
agaagtaagccaactgatatattcgcaattggttttgaagaaatggtagagttgaatgct
ggaaacattgtgaatgcaagcacaacaaaccagaagctctgggctgtggaactgcagaag
accatctccagagacaacaagtatgtgctgctggcttctgagcagttggtgggcgtctgc
ctgtttgtttttatcagaccccaacacgctcccttcatcagggacgttgcggtcgacacc
gtgaagaccggaatgggaggcgccactggaaacaagggggccgttgcgatacggatgctg
ctgcatacaaccagcctctgcttcgtctgtagccactttgctgcgggccagtcccaagtc
aaagaaagaaacgaagattttgtagaaatagcgcggaagttgagttttccaatgggaagg
atgctgttttcccacgactacgtattttggtgtggtgacttcaactatcgcattgatctc
cctaatgaagaagtgaaagagctcataagacagcaaaattgggattctcttatagcagga
gatcagcttatcaatcagaaaaatgctggacagatttttagaggatttttagaaggaaaa
gttacctttgctccaacatacaaatacgatttgttttctgacgactatgacaccagtgaa
aagtgccgcacccctgcgtggacagaccgtgtcctctggagaagaaggaaatggcctttt
gatagatcagctgaagatttagatcttctaaatgctagttttcaagatggaagcaaaatc
ctctacacgtggactcctggcactttgctgcactacggaagagccgagctaaagacttct
gaccacaggcctgtcgttgccctgattgatatagatatatttgaagttgaagccgaagag
aggcaaaacatttataaagaggtgattgcagttcaaggtccaccagatgggacagtattg
gtctcaatcaaaagttctgtcccagaaaataattttttcgatgatgctttgatcgatgag
cttctgcagcagttcacagattttggtgaagttatactcataagatttgtagaagacaaa
atgtgggttacatttttggagggaagctctgccttgagtgttctgaacctaaatggtaaa
gagttattgggtcggactataactattactttaaaaagtccagactggatcaaaaatctg
gaagaagaaatgagtttagagaaaattaacgttccgttgccgtcatcgacaagctctacc
ctgctcggtgaagatgcggaggtcacagcagatttcgatatggaaggtgatgttgatgac
tacagtgctgaagttgaggaaattcttccccagcacctccagccatcctcaagttctggc
ctcggcacttccccgagctcttcaccccgaaccagtccctgccagtcaccaaccatatca
gagggtcctgtgccttcccttcccataagaccgagtcgggcaccatcaagaacacctggg
catccatcttcacaaagttctcctatggacgctctgccggcaacacagctgcagcaaaaa
gattctcagaccttagagcccaagcggcctcctcctccccgcccggtggctcctcctacg
cgccccgcccccccacagagaccacccccaccttcagcacccaaaagccctggaaccaca
cggaaagaaaacataggacgcactcagccttcacctcaggcaggactcccaggcccagga
cctgctggatacagtgcagccagaccgactatcccgccccgcgccggagtgatcagtgcc
ccacagagtcacgctcgggcatctgctggaagactggctcctgaaagccaaagcagaccg
ccggaaggactgaaaggttcagtccttcttcccgaaccgctgaagcctcaggctgcgccc
cccgtgcagccctctctgcccccgcccgttcagaagatgcaggagccccttgtccccgtg
gcagcgcctctgcctcagtccgccccccagccaagcttggaaaccccgccgcagccgccc
cctcggagcaggtcgtcccacagcttgcctccggagccttcgccgcagccgccgcagccg
caggtgaaaacaaatggagtctctgccgtcagactggaatcacccttaaagaatgaccca
tttgaagatctgtcattcagtctgcttgctgtatccaaggctcagtcatccattcaaaca
tcatgtgctccaaccccaaacccaaaggggttgattcagttgccttctgcaacacaaagt
aacatgaatactttgagttctgtaacttgcatgcctccaattccagcccggagtaaatcc
caggaaaatatgcgatgttctccaaacccatttatcactagcttgaccagcacaaatcct
ttcaccgacaggactgcagctcccggaaacccatttagagccgagtctcaagaatcggag
gcaacttcgtgggtctccaaagacgagcctgttgccagcagtcctttcccttccctgaag
cctcttggtcataacaatagcaagccttcatcatttgatggttttaaggacagttttgat
ctgcagggccagtcttcggcaaaaatcagcaacccaaaaggatgggtaaccttcgaggag
gaggaggactttggtgtgaaagggaagtcaaagtcatcttgtccagacctgctgaataat
cagccgagttcgctctctggctccgtgacctttgatgatgactggaataaaggcacaaat
gttcctttctgtgtgttgccatcaagacgaccacctccacctcctgtcactctgccccca
cctgccaccacccctctcgtagctcctttcacaaccttgccatcgaaggcatcacccaca
ctagactttacagaaagataa
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integrated database retrieval system