Lynx rufus (bobcat): 124526783
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Entry
124526783 CDS
T08475
Name
(RefSeq) protocadherin beta-5
KO
K16494
protocadherin beta
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124526783
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124526783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
124526783
NCBI-ProteinID:
XP_046955934
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
METALAKTPQKRQVLFLAILMLLWEAGSDSIRYSIPEETESGSFVANLAKDLGLRVGELA
TRGARIHYKGNKQLLELDVETGNLLLYEKLDREVLCGVTDPCILYFQLLLENPVQFFQAD
LQLTDINDHSPEFLDKEMLLKIPESVQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV
VTHNRGDGRKYPELMLDKSLDREEQSELSLTLTALDGGDPPRSGTTAVRIEVVDINDNAP
AFLQSLYEVQVPENSPPNSLVVVVSAQDLDAGTYGNVRYTLFQGNQVIQPFVVDEVTGEI
HLKKALDFEATRYYNVEIAGTDGGGLSGKCTVAIEVVDVNDNAPELTMSMLTSTTPENSP
ETVVAVFSVSDPDSGDNGRMVCSIQNDLPFLLKPTFKNFYTLVTEKPLDRESQAEYNITI
TVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSG
ANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRGSPAL
SSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVRDNGEPPRSASVTLHVL
LVDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAAS
AGRCSGPEGHFPGHLVDVSGAGTLSQSYQYEVCLTGGSGTSEFKFLKPIIPNFPPQGIGK
EMEENATFRNSFGFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctagcaaaaacgccacagaaaaggcaagttctctttcttgctatattg
atgcttttgtgggaggctggctctgactcaattaggtattccattccagaagaaacagaa
agtggctcctttgtggccaacctggcaaaggacctggggctcagggtgggggaactagct
actcgaggcgcgcgaatccattacaaaggaaacaaacagctcttggaactggatgtagaa
accgggaatttgctgctatatgaaaaactagaccgggaggtgctgtgcggagtgacagat
ccctgtatactgtacttccagttattactggaaaacccggtgcagttttttcaggctgat
ctgcagctcacagatataaatgaccattccccagagttcctagacaaggaaatgctcctc
aaaatcccagaaagcgttcagcctgggactgtatttcctttgaaaatagctcaggacttt
gacataggtagcaacactgttcagaactacacaatcagccccaactcccattttcatgtt
gtcactcataatcgcggagatggcagaaaatacccagagctcatgctggacaaatcgctg
gaccgggaggagcagtctgaactcagtttaacccttacggcgctggatggtggggatcca
cctaggtccgggaccactgcagtccgtattgaagtcgtggacatcaatgataatgcccct
gcgtttttacagtcgctctatgaggtacaggtcccggagaacagcccgccaaactcctta
gttgtcgttgtctctgcccaagatttagatgcaggaacatatgggaatgtacgctacact
ctattccaaggcaatcaagttattcaaccatttgtagtagacgaagtaacaggagaaatt
catctgaaaaaggcattggatttcgaggcaactcgatactataacgtggaaattgcaggc
acagacggtgggggcctttcaggaaaatgcactgtagctatagaagttgtggatgtgaat
gacaacgcccccgaactgaccatgtcgatgctcacaagcacaaccccagaaaactcccca
gagactgtagttgctgttttcagtgtttctgatccagactccggggacaacggtaggatg
gtttgctccatccagaatgatcttccctttctcttgaaacccacattcaagaacttttac
accctagttacagaaaagccactggacagagaaagccaagctgagtacaacatcaccatc
accgtcaccgacttggggacccccaggctgaaaacgcagcacaacataaccgtgacggtc
tccgacgtcaacgacaacgctcccgccttcagccaaaccacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcgggc
gccaacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctggcc
tccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggattac
gaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcgctc
agcagccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtg
ctgtacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctggtg
gtgctggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctcccggaggtggcggcggccgaggcg
cgggccgacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctcttc
ctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcgtct
gcgggtcgctgctcggggcctgagggccactttccgggccacctggtggacgtcagcggc
gcggggacgctgtcccagagctaccagtatgaggtgtgtctgacgggaggctcggggact
agtgagttcaagttcttgaagccgattatcccgaacttccctccccagggcattggaaag
gaaatggaggaaaacgccaccttccggaatagctttggattcagttag
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