Lynx rufus (bobcat): 124526885
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Entry
124526885 CDS
T08475
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04360
Axon guidance
lruf04724
Glutamatergic synapse
lruf04726
Serotonergic synapse
lruf04929
GnRH secretion
lruf04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
124526885
09154 Digestive system
04972 Pancreatic secretion
124526885
09156 Nervous system
04724 Glutamatergic synapse
124526885
04726 Serotonergic synapse
124526885
09158 Development and regeneration
04360 Axon guidance
124526885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124526885
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124526885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
124526885
NCBI-ProteinID:
XP_046956038
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGKIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggacctctcgggcgcttcctcctcctccctacct
tcctccccatcctcctcttcgtcgccgaacgaagtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctacagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggat
gttgcacctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgtta
aaacaggatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgctct
gcaaaaaacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgt
ttggccagtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgag
gaattagcccggcaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattca
cgagaattggaagttatcctaaaccatacatctagtgatgaacctcttgacaaacgggga
ttactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtctcccagtctaactgccagcagttcctgaacactgtttggtttggacagatg
tcaggctaccgacgtaagcccacctgtaagaagataatgactgttttgacagttggtatc
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagtttggcaaaatc
attcacactccttttatgaaatttattattcatggagcatcgtatttcacattcctgctg
ttactaaacctatattctcttgtctacaatgaggataagaaaaacacaatggggccagcc
cttgaaagaatagactatcttcttatactgtggattattgggatgatttggtcagacatt
aaaagactctggtatgaagggttggaagactttttagaagaatcccgtaatcaactcagt
tttgtcatgaattcactttatttggcaacttttgccctcaaagtggttgctcacaacaag
tttcatgattttgctgatcggaaggactgggatgcattccatcctactctggtggcagaa
gggctttttgcatttgcaaatgttctaagttatcttcgtctcttttttatgtatacaaca
agctccatattgggtccattacagatttccatgggacagatgttacaagattttggaaaa
tttcttgggatgttccttcttgttttgttttctttcactattggactgacacaactgtat
gataaaggctataccccaaaagaacagaaggactgtgtgggcatcttctgtgaacagcaa
agtaatgataccttccattcgttcattggcacttgctttgctttgttctggtatattttc
tccttagcacatgtggcaatctttgtcacaagatttagttatggagaagaattacagtcc
tttgttggagctgttattgttgggacatacaatgtcgtggttgtgatcgtgcttaccaag
ctgctggtggcaatgcttcataaaagctttcagttgatagcaaatcatgaagacaaggaa
tggaagtttgctcgagcaaagttgtggcttagctactttgatgacaaatgtacattaccc
ccacctttcaatattattccttcaccaaagactatttgctatatgattagtagcctcagt
aagtggatttgctctcatacatcaaaaggcaaggttaaacggcaaaacagtttaaaggaa
tggagaaatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgcctagtg
catcgttacttgacatccatgagacagaagatgcaaagtacagatcaggcaaccgtggaa
aatctaaatgaactacgccaagatctttcaaaattccgaaatgaaataagggatttactt
ggctttcggacttctaaatatgctatgttttacccaagaaattaa
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