Lynx rufus (bobcat): 124526948
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Entry
124526948 CDS
T08475
Name
(RefSeq) protocadherin beta-17-like
KO
K16494
protocadherin beta
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124526948
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124526948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
124526948
NCBI-ProteinID:
XP_046956156
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
METPLPKAPQKRQVTAIIIVLILLILWEVDGMTIKYSVLEERESGSYVANLAKDLGLGLG
ELEARDARILSKGNQQYLQLEQKSGNLILKEKLDREELCSDTDPCILHFQVLLKSPVHFI
QGELQLLDVNDHAPEFLENEILLKISESSHPGTAFPLKIAQDLDVGSNTVQNYTISTNSH
FHLFTLNHSDGRRYPELVLDKALDREEQSELRLTLTALDGGSPPRTGTSQVLIVVLDIND
NAPEFAQLLYEVQVPENSPVGSLVITVFATDLDAGTYGELSYSFFQSSNQVIQAFEINAV
TGEIRLKKTLDFEEIRSYRLEIEASDGGGLSGKCTIAIEVMDVNDNAPELTMSVLISDIP
ENTPDTVVAIFGISDPDSGENGKMMCTIQDHLPFFLKLTVENFYTLVTERALDRESQAEY
NITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATD
RDSGANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRG
SPALSSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSG
QNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVRDNGEPPRSASVT
LHVLLVDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRS
RAASAGRCSAPEGHFPGHLVDVSGAGTLSQSYQYEVCLRGGSGTSEFKFLKPIFPNFVGE
AAGRDAEENSNFTNNFGFT
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaccgctacccaaagcgccacagaaaaggcaagtgaccgccattattattgta
ttaatactattaattctgtgggaggtggacggtatgaccattaaatattcggttctagaa
gagagggaaagcggctcttatgtggccaaccttgcaaaagatctggggcttggcttaggg
gagctggaggcacgggacgcccggattctttccaaagggaatcaacagtatttgcagctc
gagcagaagagtgggaatttgatcctaaaagaaaaattggaccgggaagagttgtgcagt
gacacagatccatgtatactgcatttccaggtgttactaaaaagcccagtgcactttatt
caaggtgaactacagctactagatgtaaatgaccatgccccagaattcctggaaaatgaa
atcctcctgaaaatctcggaaagcagtcatccagggactgcatttcctttgaaaatagct
caagatttagatgtgggtagtaacacagttcagaactacactattagcaccaactcccat
ttccaccttttcactctaaatcacagtgatggcaggagataccctgagctggtgctggac
aaagcgctggaccgtgaggagcaatcagagctcaggttaacgctcacggcgctggatggt
gggtcaccgccgagaactgggacttctcaggttctcattgtagtcctagacataaatgat
aatgcccctgaatttgctcagctgctctatgaggtccaggtcccagaaaacagccctgta
ggttccctcgtcatcaccgtgtttgctacagatttagatgctgggacctatggagagtta
tcctactcatttttccaatcctcaaatcaagtgattcaggcctttgaaataaacgcagtc
acgggggaaattcgattaaaaaaaacgttggattttgaggaaattcgatcttatcgtttg
gaaattgaggcctcagatggtgggggtctttcgggaaaatgcactatagccatagaagtg
atggatgtaaacgacaatgcccccgaactgacaatgtcagtactcatcagtgatatccca
gaaaacacgcctgacaccgtcgtcgcgattttcggaatttcagatccagactccggggaa
aatggcaaaatgatgtgtaccatccaagaccatctccccttctttctgaaacttactgta
gaaaatttctacactttggtgactgaaagagcgctggatagagagagccaggccgagtac
aacatcaccatcaccgtcaccgacttagggacccccaggctgaaaacgcagcacaacata
accgtgacggtctccgacgtcaacgacaacgcccccgccttcagccaaaccacctacacc
ctgcgcgtccgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccacggac
agggactcgggcgccaacgcccaggtcacctactcgctgctgccgcccgcggacccgcag
ctgcccctggcctccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagg
tccctggattacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggc
tcgcccgcgctcagcagccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaac
gcgcccttcgtgctgtacccgccgcagaacggctctgcgccctgcaccgagctggtgccc
agggcggccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggc
cagaacgcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtg
tgggcgcacaacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaag
cacaggctggtggtgctggtcagggacaatggcgagccgccgcgctcggccagcgtcacg
ctgcacgtgctgctggtggacggcttctcgcagccctacctgccgctcccggaggtggcg
gcggccgaggcgcgggccgacccgctcaccgtctacttggtcgtcgccttggcgtccgtg
tcgtcgctcttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagc
cgggcggcgtctgcgggtcgctgctcggcgcccgagggccactttccgggccacctggtg
gacgtcagcggcgcggggacgctgtcgcagagctaccagtatgaggtgtgtcttcgggga
ggctcggggaccagtgagttcaagtttctgaagcccattttccccaacttcgtgggtgaa
gcagctggtagggacgccgaggaaaactctaattttacaaataattttgggttcacttag
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