KEGG   Lynx rufus (bobcat): 124526955
Entry
124526955         CDS       T08475                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    124526955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124526955
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     124526955
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd WDR54 Beta-prop_IP5PC_F Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 124526955
NCBI-ProteinID: XP_046956125
LinkDB
Position
Unknown
AA seq 696 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKRAFKCPSLPPFEREGGSVLVN
LGGLLLQALLEYWPRTHVNPMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAG
GRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLK
KDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPGEQEKEEDIAVLAEEKIEL
LCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacggcagggcggaggaaagtgcaggtttcctatgtc
attcgagatgaagtagagaagtacaatcgaaatggagtcaatgccctgcagctggatcca
gcactgaacagacttttcacggccggtcgagactccatcataagaatatggagtgtcaat
cagcacaagcaagatccatatatagcatctatggaacaccataccgattgggtaaacgac
attgtgctttgttgtaatgggaaaacattaatatctgcttcttctgacacaacagtgaaa
gtgtggaatgcacataagggattttgcatgtcaacactaaggacacataaggattatgta
aaggccttagcctatgccaaggataaagaactggtagcttcagctgggttggacagacag
atattcctttgggatgtgaataccttaacagcattgactgcctcaaacaacactgtcaca
acctcttctttaagtgggaacaaagattccatttatagcctggcaatgaatcaactggga
acaatcattgtatcagggtccactgagaaggttttaagggtgtgggatccaagaacatgt
gcgaaactaatgaagctgaaagggcacacagacaatgtcaaagctctgctgttgaacagg
gatggtacacagtgcctttcgggcagttctgatgggacaattcgcctttggtcccttggc
caacagagatgtatagcgacgtaccgagtccatgatgaaggcgtttgggctctgcaggtc
aatgacgccttcacacacgtgtattctggtggaagggacaggaagatttactgtacagac
ttaagaaaccctgacattcgggtactaatttgtgaagaaaaagcaccagttctcaagatg
gagcttgataggtcagctgatccccctcccgcaatctgggtcgcgacgactaagtctaca
gtaaataaatggaccttgaagggaattcataatttcagagcctccggagattatgacaat
gactgtacaaatcctataacaccactttgtacgcagcctgaccaggttattaaagggggt
gctagtattattcagtgtcacattcttaatgataagagacatatattaaccaaagatacc
aataataatgtggcatattgggatgtattgaaggcatgtaaagttgaagatctgggcaaa
gtggattttgaggatgaaattaagaaaagatttaagatggtgtatgtgccaaattggttc
tcagtagacttaaaaacagggatgttgactattactttggatgagagtgattgttttgct
gcttgggtttctgcaaaagacgctggcttcagcagccctgacgggtcagatccaaaacgt
gcgtttaagtgtccttccctccctcctttcgaaagagaaggtggatctgtgctggtgaac
ttaggaggacttttactgcaggcactcctagaatattggcctagaacacatgtgaatcca
atggatgaagaagaaaatgaagtaaaccatgtaaatggggagcaggagaaccgagtgcag
aagggaaatggatattttcaagtccccccccacactcctgtgatctttggtgaagctggg
ggacgcacactgttcaggctgctctgccgagactccgggggtgagactgagtcgatgctt
cttaatgagacagtgccacaatgggtcattgacatcactgtggataaaaatatgcccaaa
ttcaacaaaattcctttctacctccaacctcacgcatcttcgggagcaaaaaccttaaaa
aaagacagactctccgccagtgacatgctccaagtccggaaggtaatggaacacgtttac
gagaaaatcatcaacttggataatgagtcgcaaaccactagctcttctaacaacgaaaag
ccaggggaacaggaaaaagaggaggatattgctgtgttggcagaggagaaaatcgaactt
ttgtgccaggaccaggttttggatccaaacatggacctccggacggtgaagcacttcatc
tggaagagcgggggcgacctcaccctccattaccgccagaagtccacgtga

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