Lynx rufus (bobcat): 124527020
Help
Entry
124527020 CDS
T08475
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124527020
Transcription factors [BR:
lruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124527020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
124527020
NCBI-ProteinID:
XP_046956228
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MKGSNRNKDHSADGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGA
DGLEQDVGETDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVL
DPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSESSRDL
PSPKKAKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTSEISSGSCRQDVSESPELRQ
KSPLFQFAEISSSTSHPDASSKQCQASALFQFAEISSNTSQLGGAEPVKRYGKSALFQLA
EMCLASEGVKMEESKLMKAKESDGGRIKELEKGKEQREIKMEKTDEARSQKEAEFEKSAK
ENVRDSKELRNFEELQMDDTMDIKMEDPKEIKKEELEEDQKCSHFPDFSYSASSKIIISD
VPSRKDHMCHPHGIMIIEDPTALNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSES
DIESVIYTIEAVAKGDWGIEKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKE
KSSDTTKESRPPDFINISASKNISGEVPEGIKAEPLTPTEDALPPSLSGQAKPEESDCHR
KIETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWNEESWT
FNQSGTSGSKKFKKTKPKEDSLLGSAKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKK
TGNMASEPTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSNKQLFLDAIH
PTEAIFSEDKNTTEPAHKVKNALSIPNTPEPTTTQEPLVGSQKRKARKTKITHLVRTADG
RVSPAGGTLDDKPKEQLQRNLPKVTESGCSDDCSHNTEAAETRSSTPEMPAVSAFFSLAA
LAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcagtaatagaaataaagatcactcagcagacggagaaggggctggaaaacga
ccaaaacgaaagtgtcttcagtggcatccattgctagcaaagaaactgcttgacttttca
gaagaggaggaagaggaagacgaagaggaggatattgataaggttcaacttcttggggcc
gatggcctagagcaagatgttggtgagactgatgatgaatcaccagaacagcgagcccgg
agaccaatgaatgcatttctcttattttgcaaacgtcatcgctcccttgtacgacaggaa
cacccccggcttgataaccgaggtgctaccaagatactggctgattggtgggctgttcta
gatccaaaggaaaagcagaaatacacagacatggccaaggagtataaagatgcatttatg
aaagcgaatcctggctataaatggtgtcctaccacaaacaagcctgtgaaatccccaaca
cccactgttaatccacgaaagaaactgtgggccttcccatctgagtcttcaagagatttg
ccaagccccaagaaagcaaagaccgaagaaatgcctcagctaaactttggaatggctgat
cctactcagatgggaggcctgagcatgctacttttagctggagaacatgctcttggaaca
tcagagatatcctctggcagttgtaggcaggatgtttcagaatcccctgaattgcgtcag
aaatcaccattatttcagtttgctgagatatcttcaagtacgtctcaccctgatgcttct
tcaaagcagtgtcaagcctcagccttgtttcagtttgcagagatttcttcaaacacttca
cagctgggtggtgcggaacctgtgaaacgctatggaaaatctgcactctttcaactggca
gagatgtgtctggcatcagagggggttaaaatggaggaatcaaagctaatgaaggcaaaa
gaatcagatggtggaagaattaaagaattggagaagggaaaggaacaaagagaaataaaa
atggagaaaacagatgaagccaggtcacagaaggaagcagaatttgaaaaatcagctaag
gaaaatgtaagagattctaaggaactaagaaattttgaggaactacaaatggatgataca
atggatataaaaatggaagatcccaaagaaattaaaaaggaagaactagaagaagatcaa
aaatgtagtcacttccctgatttttcttattctgccagtagcaagataataataagcgat
gttcccagtagaaaggatcatatgtgccatcctcatggaattatgatcattgaggatccc
acagcattaaacaaaccagagaaactaaaaaagaaaaagaagaaaagcaaaatggatcga
catggaaatgataaatccacacccaagaagacttgcaaaaagaggcagtcttcagagtct
gacattgagagtgttatatacaccattgaagccgttgcaaagggagactggggcatcgag
aaacttggagaaacccctcgcaagaaggtccgcacatcttcaagtggcaagggaagcatt
ttggatgccaagccaccaaagaaaaaagtgaaatcaagagagaagaaaatgtcaaaggag
aaatcctcagacaccaccaaagagtcaagacctccagatttcattaatatttctgccagc
aagaacatttctggtgaggtgccagagggtataaaagcagaaccattgacccccacggag
gatgcattaccaccgagcctatctggacaggccaagcctgaggaaagtgactgtcacaga
aaaatagagacttgtggctcccggaaatctgagaggtcttgcaaaggtgctctttataaa
accctggtgtctgaaggcatgctcacctctctgcgagctaatgttgacagagggaaacga
agctcaggaaaaggaaactcctctgaccatgaagggtgttggaatgaagaaagctggacg
tttaatcagagtgggaccagtgggagcaagaagttcaagaagaccaagccaaaggaagat
tctctccttggctcagcaaagctggatgaagaatttgaaaagaaattcaacagcctccct
caatacagtcctgttacatttgaccggaaatgtgtacctgtcccaagaaaaaagaagaag
actggaaacatggcctcggaaccgactaaaaccagcaaaggtcctttccagtctcagaaa
aagaacttattccacaaaattgtcagcaaatataagcacaaaaaggagaagcctaatgtt
ccggaaaaaggaagtggggacaaatggtcaaacaagcaactcttcttggatgccattcac
cctacagaagccatattttcagaagacaaaaacaccacagagcctgctcataaggttaaa
aatgccctatccattcccaacactccagagccaacaacaactcaagaacccttggtgggc
agccaaaagagaaaagcaaggaaaaccaagatcactcaccttgtcaggacagcagatggc
cgggtgtcaccagcaggaggtactttggatgacaaaccaaaggaacaactgcagaggaat
ctccctaaagtgaccgagtccggctgcagtgatgactgctcacacaacactgaggccgcg
gagacgcggagcagcactccggagatgccagccgtgtctgcgttcttcagtctcgccgcg
ctggctgaagtggccgccatggagaacgtacacagaggtcagaggtccactccgctcacc
catgatggacagccaaaagaaatgccacaggctcctgtacttatttcctgcgctgaccag
tga
DBGET
integrated database retrieval system
