Lynx rufus (bobcat): 124527022
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Entry
124527022 CDS
T08475
Name
(RefSeq) protocadherin beta-7-like
KO
K16494
protocadherin beta
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124527022
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124527022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
124527022
NCBI-ProteinID:
XP_046956264
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MEARVMPEVQKRQVFFLCVFLGMSWAGTEPLRYFVAEETERETFLANLANDLGLGVGELS
ARGSRVISDENIRFLLFKPLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE
LWVRDINDHSPVFLDRETTLKILESTTPGATFLLESAQDSDVGINNLRNYTISSNAYFHI
NVRDSGEGNVYPELVLDAVLDREKVSELNLTLTALDGGSPPRSGTALIRILVLDINDNIP
EFAQSLYKVQVPEDSPVGSLVVAVSARDLDTGTNGEIVYAFFYATEVILKTFRINSTSGK
LYLKAELNYEAIQTYTLTIQAKDGGGLSGKCTVVVHVTDINDNPPELLMSSLTSPIAENS
PETVVAVFRIRDRDSGNNAKMVCSIQDHLPFVLKPSVQNFYTLVTERPLDRESQAEYNIT
ITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDS
GANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRGSPA
LSSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVRDNGEPPRSASVTLHV
LLVDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAA
SAGRCSAPEGHFPGHLVDVSGAGTLSQSYQYEVCLRGGSGTNEFKFLKPIIPNLQFQSTR
KEVEEYPSFQNDLGF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagagtgatgcctgaagtgcagaaaaggcaagtgttttttctttgtgtattt
ctgggaatgtcttgggctggcacagaaccgcttcggtattttgtggcggaggaaacggag
agagagacctttctggccaacctagcaaatgatctggggttgggggtgggggaactgtca
gctcggggatctagagtcatttcagatgagaacatacgatttttactattcaagccgctt
actggtgatttacttctaaatgagaaattagaccgagaggaactgtgtgggcccagagag
ccgtgtgtgctacctttccagttgttacttgaaaagccttttcagattttccgtgctgaa
ctatgggtcagagacatcaacgatcattctccagtatttctagatagagagactaccttg
aaaatattagaaagtaccactccaggggcaacatttctcctagaaagtgcacaggattca
gatgttggaatcaacaacctgagaaactacaccatcagctccaatgcctatttccatatt
aatgtccgtgatagtggggagggaaatgtttatcctgaattggtcctggatgcagtgctg
gatcgtgaaaaggtttctgagctcaatttaaccctcacagccttggatggcgggtctccg
cccagatccgggactgccctcatacgcatcctggttttggacataaatgataacatccct
gaatttgcacagtccctctacaaggtgcaggtgcctgaagacagccctgttggctccctg
gttgtcgctgtgtcagctagagatttagatacaggaactaatggagaaatagtctatgca
tttttttatgccactgaagtaattctcaaaacatttcgaatcaattcaacatctggcaag
ctttatcttaaagccgaattgaactacgaggcaatacaaacttatacattaactattcag
gccaaagatggcggagggctttctggaaaatgtacagtggtggtccatgtaacagatata
aatgataatccaccggaactgcttatgtcatcacttactagcccaattgcagaaaactca
cctgagacagtagtagctgtttttaggattagagacagagattcagggaacaatgcaaag
atggtgtgctccatccaagaccatctccccttcgtcctgaagccttcagtacagaatttc
tacaccctggtaacagagagacccctggacagagagagccaggccgagtacaacatcacc
atcaccgtcaccgacttggggacccccaggctgaaaacgcagcacaacataaccgtgacg
gtctccgacgtcaacgacaacgcccccgccttcagccaaaccacctacaccttgcgcgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcg
ggcgccaacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctg
gcctccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggat
tacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcg
ctcagcagccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttc
gtgctgtacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctg
gtggtgctggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctcccggaggtagcggcggccgag
gcgcgggccgacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctc
ttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcg
tctgcgggtcgctgctcggcgcccgagggccactttccgggccacctggtggacgtcagc
ggcgcggggacgctgtcgcagagctaccagtatgaggtgtgtcttcggggaggttcgggg
accaatgagttcaagttcctcaagcccattatccctaatctgcagtttcaaagtacaaga
aaggaagtggaagaatatccctcatttcagaatgatttgggtttctga
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