Lynx rufus (bobcat): 124527105
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Entry
124527105 CDS
T08475
Name
(RefSeq) protocadherin beta-8-like
KO
K16494
protocadherin beta
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124527105
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124527105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
124527105
NCBI-ProteinID:
XP_046956354
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MEASGKFICRQRQVVLFFVLLGLSQAGMEPGRYSVVEETEGSSFVTNLAKDLGLGQRELS
KRGARVISKGNKLHLKLDQETGDLLLNEKLDREELCGHTDPCVLRFQVLLENPLQFFQAE
LQVIDINDHSPVFVDRDMLLKISESSPPGTTFPLKNAKDVDVGRNNIETYIISPNSYFRV
LTRKSSDGSRYPELVLDKALDREQEPELRLTLTAQDGGSPPRSGIAQINIEVVDINDNAP
EFEQSLYRVKIPEDSPIGFLIVTVSATDADIGVNGEISYSLFQASEEICKTFEINSMTGE
IRLKKQLDFERIQFYEVNIEARDSGSFSGKCTVLTQVLDVNDNAPEITMSAFTRHIPENS
PEAMVAVLSVSDLDSEENGKINCTIQDDLPFLLKSSLENFYTLVTERPLDRESQAEYNIT
ITATDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDS
GANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRGSPA
LSSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVRDNGEPPRSASVTLHV
LLVDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAA
SAGRCSAPEGHFPGHLVDVSGAGTLSQSYQYEVCLRGGSGTSEFKFLKPNVPNFQGHSPG
PEIEENANFRNDFGFSIQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagtgggaagttcatttgcagacaaaggcaagtcgttttattctttgtcctc
ttgggcttatctcaggcgggtatggaacctgggcgctattctgtggtggaggaaaccgag
ggtagctcctttgtaaccaatttagcaaaggatctaggtctgggtcagagggaactctcc
aagcgtggggcaagggttatttccaaagggaacaaactacatttgaagctggatcaggag
actggagatttgttgctaaatgagaaactggaccgggaggaattgtgcggtcacacagac
ccctgtgtgctgcgtttccaggtgttgctagaaaatcccttacagttttttcaagctgag
ctacaagtaatagacataaatgaccattccccagtattcgtagacagagatatgttgcta
aaaatatcagagagcagtccacctggaactacatttccactgaagaacgctaaggatgtg
gacgtaggccgaaataatattgagacctatataatcagtcccaactcttattttcgcgtc
ctcacccgcaagagcagtgatggcagcagatatcctgagttggtgctggataaagcgcta
gatcgagagcaggaacctgagctcaggttaacccttacagctcaggatggcggctctcca
cccaggtctggcatcgctcagatcaacattgaagtcgtggacatcaatgataacgcccct
gaatttgagcagtctctctatagggtgaaaattcctgaggacagtccgataggcttcctg
attgtcacagtctctgctacggatgcagacataggagtcaacggagagatttcctattca
cttttccaggcttctgaagagatttgcaaaacctttgaaatcaattccatgacgggagaa
attcgacttaaaaaacaacttgattttgaaagaatacagttctatgaagtcaatattgag
gccagagattctggcagcttttctggaaaatgcaccgtcctgactcaagtcttggatgtg
aacgacaatgccccagaaatcaccatgtctgcatttactagacacatacctgagaactcg
cctgaggctatggttgcagttctcagtgtttcagaccttgattcggaagaaaatgggaaa
ataaattgcacaattcaggacgatctaccctttctcctgaaatcttccttagaaaatttt
tacaccctggtaacagagagacccctggacagagagagccaggccgagtacaacatcacc
atcaccgccaccgacttggggacccccaggctgaaaacgcagcacaacataaccgtgacg
gtctccgacgtcaacgacaacgcccccgccttcagccaaaccacctacaccctgcgcgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcg
ggcgccaacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctg
gcctccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggat
tacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcg
ctcagcagccaggcgcgcgtgcgcgtgctggtgctggacgacaacgacaacgcgcccttc
gtgctgtacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacagcccggctgctgagcgagcgcgacgccgtcaagcacaggctg
gtggtgctggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctcccggaggtggcggcggccgag
gcgcgggccgacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctc
ttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcg
tctgcgggtcgctgctcggcgcccgagggccactttccgggccacctggtggacgtcagc
ggcgcggggacgctgtcgcagagctaccagtatgaggtgtgtcttcggggaggttcgggg
accagtgagttcaagttcctcaagccaaatgtgcccaatttccagggccactcccctggg
ccagaaatagaagaaaacgccaactttaggaatgactttggttttagtattcagtga
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