Lynx rufus (bobcat): 124527273
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Entry
124527273 CDS
T08475
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124527273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124527273
Cell adhesion molecules [BR:
lruf04515
]
Immunoglobulin superfamily
ROBO family
124527273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Big_4
Motif
Other DBs
NCBI-GeneID:
124527273
NCBI-ProteinID:
XP_046956416
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MATTVTTVTPSAALVLFPTDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRI
VEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFL
RIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVME
CQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERE
SEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIR
DDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRT
VTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSTSRFSVSQTGDLTITNVQRSDVGYYI
CQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPAPTIL
WRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGV
PVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSW
QTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHK
QVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGESEWLVFE
VRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKN
DGNGTAILVSWQAPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIR
YSIEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAAC
WIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNI
GEPATQPWLADTWPNTGNSHNDCSITCCTAANGNSDSNLTTYSRPADCIANYNNQLDNKQ
TNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNM
NNGSGDPSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTG
GSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVD
ESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSP
QEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAP
EEEEYEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGR
SSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTD
SNMSAAVIQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVM
APKLPSIEARTDRSSDRKVGSYKGREVLDGRQVADMRTNPGDTREAQEQQNDGKGRGNKA
AKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNI
AEMQVLGGYERGEDNNEELEVSIIFFQVSQHYASY
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggcaactactgttactactgtgaccccatcagcagctctggtgttgtttccgacagac
cctgaagacctagagagggggaacgacaacgggacgcccatccccacctctgataatgat
gacaattcgctgggctacacaggctcccgtcttcgtcaggaagattttccacctcgcatt
gttgaacacccttcggacctaattgtgtcaaaaggagaacctgcaactttgaactgtaaa
gctgaaggccgccccacacccactatcgaatggtacaaagggggggagagagtggagacg
gacaaagatgaccctcgatcacaccgaatgttgctgccaagtggatctttatttttctta
cgtatagtacatggacgaaaaagcaggcctgatgaaggggtctacgtctgtgtagcaagg
aattacctcggagaggccgtgagccataatgcatcgctggaggtggctatactccgggat
gacttcagacaaaatccttccgatgtcatggtggcagtgggggagcctgcagtgatggaa
tgccagcctccacgaggccatcctgaacccaccatttcatggaagaaagatggctctccg
ctggacgataaagatgaacgaataactattcgaggaggaaagctcatgatcacttacacc
cgcaaaagtgatgctggcaaatacgtttgtgttggtaccaacatggttggggaacgggag
agtgaagtggctgagctaacggttttggagagaccatcgtttgtaaagagacctagtaac
ttggcggtaactgtggacgacagtgcggaatttaaatgtgaggcccgaggtgaccctgtg
cctacggtacgatggaggaaagatgatggagaactgcccaaatccagatatgaaatcaga
gatgatcataccttgaaaattcggaaggtgatggctggtgacatggggtcatatacttgt
gttgcagaaaatatggttggaaaagcagaagcatcagctactctgactgtccaagttggg
tctgaacctccacattttgttgtgaaaccccgtgaccaggttgttgctttggggcgaact
gtaacttttcagtgtgaagcaactggaaatcctcaaccagctattttttggagacgagag
gggagtcagaatctgcttttctcatatcagccaccacagtcaaccagccgtttttcagtc
tcccagactggtgatctcactatcactaacgtccagcgatctgatgttggttattatatc
tgccagactttaaatgttgctggaagtatcatcacaaaagcatatttggaagtaactgat
gtgattgcagaccggcctcccccggtcattcgacaaggtcctgtgaatcagactgtggcc
gtggatggtactttagtgctcagctgtgtggccacaggcagtccagcacccacgattctt
tggagaaaggatggagtgcttgtttcaacccaagattctcgaatcaaacagctggagaca
ggagtgctgcagatccgatatgctaagctgggtgacacaggtcggtacacctgcattgca
tcaacccccagtggtgaggcaacatggagtgcttacattgaagtccaagaatttggagtt
ccagttcagcctccaagacccactgacccaaatttaatccctagtgccccctcaaaacct
gaagttacagatgtcagcagaaatacggtaaccttgtcatggcaaccaaatttgaattca
ggtgcaactccaacatcttacattatagaagccttcagccacgcatctggtagcagctgg
cagactgtagcagagaatgtgaaaacggaaacattcgccattaaaggactaaaacctaat
gcaatttaccttttccttgtgagagcagcaaatgcatatggaattagtgatccaagccag
atatcagatccagtgaaaacgcaagatgttcccccaacaagtcagggagtagatcacaag
caggtccagagagaattgggaaatgttgtactgcacctgcacaaccccaccatcctttct
tcctcttcaatcgaagtacactggacagtggaccaacaatctcagtatattcaaggatat
aaaattctttatcggccatcaggagccaaccatggtgaatcggagtggttagtttttgaa
gtgaggaccccaaccaaaaatagcgtggttatccctgatctcaaaaagggagtcaactat
gaaattaaggctcgtcctttttttaatgaatttcaaggagcagatagtgaaattaagttt
gcaaagaccttagaagaagcacccagtgccccaccccaaagtgtaactgtgtcaaagaat
gatggaaatggaactgcaattcttgttagttggcaggcgcctccagaagacactcaaaac
ggaatggtccaagagtataaggtttggtgtctgggcaatgaaactagatatcatataaac
aagacagtagatggttccaccttttctgtggtcatcccttctctggttcctgggatccgg
tacagcatagaggtggcagccagcactggggccggggccggggtgaagagcgagccacag
ttcatccagttagattctcatggaaaccctgtgtcgcctgaagaccaggtcagccttgct
cagcagatctccgatgtggtgaagcagccagcgttcattgccggaatcggggcagcctgc
tggatcatcctcatggtgtttagcatctggctttatcgacaccgcaagaagagaaatggg
ctgactagtacttacgcgggtatcagaaaagtcccgtcttttaccttcacaccaacagta
acttatcagagaggcggtgaagctgtaagcagtggagggaggccaggacttctgaacatc
ggtgaacctgccacacagccatggctggccgacacatggcctaatactggcaacagtcac
aatgactgctccatcacttgctgcactgcagccaatggtaacagtgatagcaacctgacc
acctacagtcgcccagctgattgtatagcaaattataacaaccaactggataacaaacaa
acaaatctgatgctccctgagtcaactgtttatggtgatgtggaccttagtaacaaaatc
aatgagatgaaaaccttcaatagcccaaatctgaaggacgggcgttttgtcaatccatca
gggcagcccactccttacgccaccacccagctcatccagtccaacctcagcaacaacatg
aacaatggcagtggggaccccagcgagaagcactggaagccacctggacagcagaaacag
gaagtggcaccaattcagtataacatcatggagcaaaacaaactgaacaaagattatcga
gcaaatgacacaattcctccaactatcccatacaaccagtcatacgaccagaatacagga
ggatcttacaacagttcagaccggggcagtagtacatctgggagtcaagggcacaagaaa
ggggcacggacacccaaagttccaaaacagggtggcatgaactgggcagacctgcttcct
cctcccccagcacatcctccacctcacagcaatagtgaagagtacagcatttctgtagat
gaaagttatgaccaagaaatgccatgtcctgtgccaccagccaggatgtatttgcaacag
gacgaactggaagaggaggaagatgaacgaggccccaccccccctgtacggggagcagct
tcttctccagctgctgtgtcttacagccatcagtccactgcgacactgaccccgtctcca
caagaagaactccagcccatgttacaggattgcccagaggagattggccacatgcagcac
caacccgataggagacggcagcctgtgagtccccctccgccaccacgaccgatttcccca
ccacatacctatggctacatttcaggacctcttgtctcagatatggatacggatgctcca
gaagaggaagaatatgaagcagacatggaagtggccaagatgcagaccagacggcttttg
ttacgtgggcttgagcagacccctgcctccagtgtaggggacctcgagagctctgtcact
gggtccatgatcaatggctggggctcagcctcagaggaggacaacatttccagtggacgc
tccagtgttagttcttccgatggctccttcttcaccgatgccgattttgcccaggcagtg
gcggcagcagcagagtatgctggcctcaaagtggcacgtcgccaaatgcaggatgccgct
ggccgccgacattttcatgcatcccagtgcccaagacccacaagtcctgtttctacagac
agcaatatgagtgctgcagtaatacagaaggccagaccagccaagaagcaaaaacaccag
ccaggacatctgcgcagagaagcctacacagatgatcttccacctcctccggtgccacca
cctgctataaagtcacccactgtccaatccaaggcacagctggaggtacgacctgtaatg
gcacccaaactaccttctatagaagcaagaacagacagatcatcagatagaaaagtaggc
agctacaaggggagagaagtattggatggaagacaagttgcagatatgagaacaaatcca
ggtgataccagagaagcacaggaacagcaaaatgatgggaaaggacgaggaaacaaggca
gcaaaacgcgaccttccaccagcaaagactcatctcatccaagaggatattctaccttac
tgtagacctacttttccgacatcaaataatcccagagatcctagttcttcaagctcaatg
tcatcaagaggatcaggaagcagacaaagagaacaagcaaatgtaggtcgaagaaatatt
gcagaaatgcaggttcttggaggatatgaaagaggagaagataataatgaagaattagag
gtatctataatttttttccaagtttctcagcattatgctagttattaa
DBGET
integrated database retrieval system