Lynx rufus (bobcat): 124527336
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Entry
124527336 CDS
T08475
Name
(RefSeq) germinal-center associated nuclear protein-like isoform X1
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124527336
03036 Chromosome and associated proteins [BR:
lruf03036
]
124527336
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
124527336
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
124527336
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
124527336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCM3AP_GANP
NupH_GANP
SAC3_GANP
CID_GANP
RRM_1
CNOT11
Motif
Other DBs
NCBI-GeneID:
124527336
NCBI-ProteinID:
XP_046956458
LinkDB
All DBs
Position
Unknown
AA seq
1989 aa
AA seq
DB search
MNPTNPFSGQQPGVFPASSSSSIGTFQAKPPFRFGQPSPFGQSNTLSGKTSGFSQVSSFP
TSSGVSHSSSAQTLGFSQTSNVGLFSGLEHTPAFVAASGPSSSCVPGNPGFSFKSSNFGT
FPSASTFGPETGEITSSGFGKTEFSFKPLENSVFRPILGAESEPEKTQSQITSGFFTFSH
PISSGPGGLAPFSFSQGTSTASNSNFTFSKPVNSNNSSSAFASALSNQNVEEEKRGPKSL
FGSSNSSFTSFPISSGSLGEPYPVSKTGVRQGCEEGISQMEPLPSLMKGLKRKEDQDRSP
RRHGHDGAEDVDALSRGDHPPDKRPVRLNRPRGGTLFGRTIQDVFKSNKEVGRLGNKESK
KEVGCTESVENDPVAIPGGSQSSSALSRLPGVKEEETESRDKKEDSLRGTPGRQSKRSES
TDSLGGLSPAEITAIQCKNIPDYLNDRTILEKHFGKIAKVQRICTRRSKKLAVVYFFDHA
SAALARKKGKSLHKDMAVFWHKKKLSPNKKPFSLKEKKPGDGETGQGPEDASFQHSPLSK
PVGRAAAVSLLSKSSPVKKPSLLKTHQFEGDPFDSGSEGSEGLGPCVSSLSALIGTVAET
SEEKYRLLDQRDRIMRQARVKRTDLDKARTFVGTCPDMCPEKERYMRETRSQLSVFEVVP
GTDQVDHAAAVKEYSRSSADQEEPLPHELRPSAVLSRTMDYLVAQIMDQKEGSLRDWYDF
VWNRTRGIRKDITQQHLCDPVTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKC
LQSLKEMYQDLRNKGVFCASEAEFQGYNVLLNLNKGDILREVQQFHPAVRNSSEVKFAVQ
AFAALNSNNFVRFFKLVQSASYLNACLLHCYFNQIRKDALRALNMAYTVSTQRSTVFPLD
GVVRMLLFRDCEEATDFLNYHGLTVSDGCVELNRSSFLEPEGLSKARKSVVITRKLTVSV
GEIVNGGPLPPIPRHTPVCSFNSQNKYVGESLAAELPTGTQRPGLDSGEGKGEACGTEAD
VPPPALQQPLPIPAPTPASLPHLPAPTPSTVPGLFQPPVQAPLPPPVQPELLPPRPAPAY
SDADLAQVVDELIQEVLQRDCEEVGAAGAAFATTALGVSNAAMEELLTAATTGILRHIAA
EEVSKERERKEEERRQAEEERLKQERELVLTQLSHGLATELTELVVTECVRETCSQELKN
AVETDQRVRMARCCEDVCAHLVDLFLGEEIFQTAKETLQELQCFCKYLQRWREAVAARKK
LRRQMRAFPAAPCCVDMNNRLKALAPSAECPIAEENLAKGLLDLGHAGKLGISCTRLRWL
RNKTVHQMKVQHFHKQLLSDAAWTPLDLPSLVAKYLPGRWECVFWKLVLVLPDGEEQSPG
SPGRILANWLQVKFMGGDGSVGDTGTMAGGIQTLALFHALSSKGDQTVAVNVCIKMLFQV
AHGALSDCALDAVETQKELLGASGLMLLLPPKVESEDMAEEDVYWLSALLQLKQLLQAKP
FQPALPLVVLVPSPGGDVMEKEVEDGLMLQDLVSAKLISDYTVIEIPDSINDLQGTTKVS
RAVQWLVSHCPCSLDLCCQTLIQYVEDGVGREFSGRFFHDRRERRQGGLVSQEPGAIIEL
FNSVLHFLASLVSSEQLCDLSWPVTEFAEVGGSRLLPHLHWNAPEHLAWLRQAVLGFQLP
QMDLPPPGAPWLPVCSMVVQYASQIPSSCQTRPVLQSQVENLLRRTYRRWKSKSHSLGQG
AGPSVAEIPWDDIIALCINHRLRDWTPPRLPITSEALSEDGQICVYFFKNHLKAYDVPLS
WEQARMQTQKELHLSHGRLGIKSLHPSANKFPAPILHMHWKGKRNVEHGPEGRAPSTQDL
MRGASAQELLAQCLSRSLLLEKEESKRFEDQLQQWLSADAGVFTDATSLPLYLPQTLVSL
PQTIEPVMKTVTTTSPQNERPREQLQLSEATGTSVTERLKHLERLMQSSREEEVASELHL
SALLDMVDI
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaaccaatcctttcagtgggcagcagcctggggtttttccagcatcttccagt
agttccataggaacatttcaggctaagccgccatttcgatttggtcagccctcgcctttc
ggacagagcaatacgttatctgggaaaacgtcaggattttcacaggtatccagctttcca
acatcttcgggagtaagtcattcttcttcagcacaaacattaggattttcccagacctca
aatgttggactgttttcaggacttgaacacactccagcctttgtagctgcctctgggcct
tcaagttcatgtgtgcctggaaacccaggatttagttttaaatcatccaactttgggact
ttcccaagtgcttctacatttggaccagaaactggagaaataacaagctctggttttggg
aaaacagaatttagctttaaacctctggaaaattcagtgttcagaccaatattgggggct
gaatctgagcctgagaaaactcagagtcaaattacttctggatttttcacattttctcac
cccattagtagcggacctgggggactggcaccattttctttttctcaggggacaagtaca
gctagcaattcaaatttcaccttttcaaaaccagttaacagtaataattcatcatctgcc
tttgcctctgctttgtcaaaccaaaatgtagaggaagagaagagaggccctaaatcacta
tttggaagttctaatagtagcttcactagcttccccatatcttcagggtctttgggagaa
ccctacccggttagcaaaaccggggtcagacaaggatgtgaagaaggtatatcccaaatg
gagccacttcccagcctcatgaaaggactgaaaaggaaggaggaccaggatcgctcccca
aggaggcatggccatgatggagcagaagatgtggacgctctgtcgaggggagatcatcct
ccagataaacgacctgtccgcctgaatcgaccccggggaggcaccttgtttggtcgaacg
atacaggatgtcttcaaaagcaataaagaagtaggtcgtcttggcaacaaggaatctaaa
aaggaagttggttgtactgagtccgtggaaaatgaccccgtggccatcccaggagggagt
cagtcttcctcagcactttcccggctcccaggtgtgaaggaggaggaaactgaaagtaga
gataaaaaagaagattctctaagaggaacacctgggcgtcaaagtaaaagaagcgagagc
acagacagtcttggaggcttgtctcctgctgaaatcacagctatccagtgcaagaacatc
cctgactatctcaacgacagaaccattttggagaaacactttggtaaaattgctaaagtg
cagcgcatctgtaccaggcgcagcaaaaagcttgccgtggtatatttttttgatcatgca
tctgcagccctggctaggaagaaggggaaaagtctgcataaggacatggctgtcttttgg
cacaagaagaaactgagtcccaataagaagcccttttccctgaaggagaagaagccaggt
gacggtgaaactggccagggcccggaggacgcatcctttcagcactcccctcttagcaag
cccgtggggagggctgcagctgtcagcctcctgagtaaaagctctccagtgaagaagcca
agtcttctaaagacccatcagtttgagggagacccttttgattcgggctctgagggctcc
gagggtcttgggccatgtgtgtcatctcttagcgccctgataggcaccgtggctgagaca
tctgaggagaagtaccgcttgcttgaccagagggacaggatcatgcgacaagctcgggta
aaaagaactgacctggacaaagcaagaacttttgttggaacgtgcccagatatgtgtcct
gagaaggagcggtacatgcgggagacccggagccagctgagcgtgtttgaagtggtccca
gggactgatcaggtggatcacgcagcagccgtgaaggagtacagccgctcctctgctgat
caggaagagcccctgccgcatgagcttcggccctcggcagtgctcagcaggaccatggac
tacttggtggcccagatcatggaccagaaggagggcagtctgcgggactggtacgacttc
gtgtggaaccgcacacggggcattcggaaggacatcacacagcagcacttgtgtgaccct
gtgacggtatccctgattgagaagtgtactcggttccatatccactgtgctcacttcatg
tgtgaggagcccatgtcctcttttgatgccaagatcaacaatgagaacatgaccaagtgc
cttcagagtctgaaggagatgtaccaggacctaagaaacaagggtgtgttctgtgccagc
gaagcagagttccagggctacaatgttctgctcaatctcaataagggggacatcctaaga
gaagtacaacagttccatcctgctgttagaaattcctccgaagtgaaatttgctgttcag
gcttttgctgcattgaacagtaataattttgtgagatttttcaaactggtgcaatcagct
tcttatctgaacgcatgtcttttacattgttactttaatcagatccgcaaggacgctctc
cgggcgctcaacatggcgtacaccgtgagcacgcagcgctccaccgtctttcccctggat
ggcgtggtgcgcatgctgctcttcagagattgtgaggaggccacagacttcctgaactac
cacggtctcactgtctctgatggctgtgttgagctgaaccggtcctcgttcctggaacca
gaggggttatccaaggccaggaagtcggtggttattaccaggaagctgacagtgtcggtt
ggggaaatcgtgaatggagggccattgccccccatccctcgtcacactcccgtgtgcagt
ttcaactcccagaacaagtacgttggggagagcctggctgcggagctgcccacaggcact
cagagacccggcttggactcaggtgaggggaaaggagaggcgtgtggtacagaggcagat
gtgcccccacctgctctccagcagcctcttcccatccctgcacccacaccagcttctctg
cctcacctcccggcaccaactccgagcacagtgcctggcctcttccagccacctgtgcag
gcccccctgccgccccctgtgcagcctgagttgcttcctccgaggcctgcacctgcgtac
tctgatgcggacctggctcaggtggtggatgagctcatccaggaggttcttcagagggac
tgcgaggaggttggcgccgctggagcggcctttgcgaccacagctctgggtgtttccaat
gctgctatggaggagctgttaacagctgcaaccacaggcattttgaggcacattgcagct
gaggaagtgtctaaggaaagggagcgaaaggaggaggagaggcggcaggctgaagaggaa
aggttgaaacaagagagagaactggtgttaactcagctgagccatggcctggctacagag
ctgacagaacttgtggtgacagaatgtgtgagggaaacctgttcccaggagttgaagaat
gcagtggagacagaccagagagtccgcatggcccgttgctgtgaggatgtctgtgctcac
ctggtggacttgtttcttggggaggaaattttccagactgcaaaggagaccctccaggaa
ctgcagtgcttctgcaagtatctgcagcggtggagggaagccgtcgcagcccggaaaaaa
ctgaggcgccagatgcgggctttccctgcagcgccttgctgtgtggacatgaacaaccgc
ctgaaggcattggcacccagtgcagagtgccccattgctgaggagaatctggccaagggc
ctcctggatctgggccatgcagggaaactgggcatctcctgcaccaggttacggtggctc
aggaacaagacagtgcaccagatgaaggttcagcactttcacaagcaactgctgagtgat
gcagcatggacacccctggacctgccatccctcgtggccaagtacctccctggaaggtgg
gagtgtgtgttttggaagctggtgctggtgttgcctgatggagaagagcagtccccaggg
agtcctggcagaattttagcaaactggttacaagtcaagttcatgggaggtgatggctca
gtgggcgacacaggcaccatggctgggggaattcagacgcttgcgctgtttcacgctctc
agcagcaaaggggatcagacagtcgctgtcaatgtgtgtataaagatgttgttccaggtg
gctcacggtgctctcagcgactgcgcccttgatgctgtggagacgcagaaggagctcctg
ggagccagtgggctcatgctgctgcttccccccaaagtggagagtgaggacatggcggag
gaggacgtgtactggctgtctgcgttgctacagctcaagcagctcctgcaggccaagccc
ttccagcctgcacttccacttgtggtccttgtacctagcccaggaggggatgtcatggag
aaggaagtggaagatggtctgatgctacaggatttggtttcagctaagctgatttcagat
tataccgttattgagattcctgattccattaatgatttacaaggcacaactaaggtttca
cgggctgtgcagtggctggtctcccactgcccctgttcccttgacctttgctgccagacc
ctcattcagtacgtggaagatggggttggccgtgagtttagcggccggtttttccatgac
agaagagagaggcggcagggcggcctggtctcacaggagcctggagccatcattgagctg
ttcaacagtgtgctgcacttcctggcctccctggtgtcatctgaacagctgtgcgacctg
tcctggcctgtcactgagtttgccgaagtagggggcagccggctgcttcctcaccttcac
tggaatgccccggagcacttggcctggttaaggcaggctgtgcttggcttccagcttcca
cagatggaccttccacccccgggggcgccctggctccccgtatgctccatggtggtccag
tatgcctcccagatccccagctcttgccagactcggcctgtcctccagtcccaggtggaa
aacctgctccgcagaacctaccgcaggtggaagagcaagagccattcgctgggccagggg
gcagggccctcagttgccgagatcccatgggatgacataattgccttgtgcatcaaccac
aggctgagggactggacaccccctaggcttcctatcacatcagaggctctgagtgaagat
ggtcagatatgtgtatatttttttaaaaaccacttgaaagcatatgatgttcctttgtca
tgggaacaagccagaatgcagacacagaaggagctacatctgagtcatgggcgtttgggg
ataaagtctttgcatccgtctgcaaacaagtttcctgctccgatactgcacatgcactgg
aaagggaagaggaatgtagagcatggcccagaggggcgggctcccagcacccaggatctg
atgcgtggagcctctgcccaggagctcctggcccagtgtctgtcccggagtctgctgctg
gagaaagaggagagcaagaggtttgaagatcagcttcagcagtggttgtctgcagacgca
ggagtgtttacagatgcaacatcccttcccctctaccttcctcagaccctggtgtctctg
cctcagactattgaacctgtgatgaagacagtgaccactaccagccctcagaatgaaagg
ccaagggagcaactgcagttgtcagaggcaacaggcacatctgtgactgaacggctcaag
cacctggaaaggctgatgcagagttcaagggaggaggaagttgcctctgagctccatctc
tctgcactgctggacatggtggacatttga
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integrated database retrieval system
