Lynx rufus (bobcat): 124527456
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Entry
124527456 CDS
T08475
Name
(RefSeq) protocadherin beta-12
KO
K16494
protocadherin beta
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124527456
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124527456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
124527456
NCBI-ProteinID:
XP_046956485
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MENGRADTLQIRQVLLLFVLLGISQAGSESGRFSVAEEMQSGSFVGNLAKDLGVEVGELF
SRGAQVVSNDNKNRLQLDKNTGDLLLSESLDREELCGSTEPCVLHFQVLMKNPLQFLRIE
LQVTDINDHSPIFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINALKNYMISPNSHFHI
KIRVNPDNRKYPELVLDKALDYEEQSELSFILTALDGGSPPRSGTATVRVVVVDINDNSP
EFEQPFYEVKIPENSILGSLIVTVSAWDLDSGKNGEISYSFSHASEDIRKTFEINQKSGE
VSLTASMDFETIESYSVIIQATDGGGLFGKSTVRIQVMDVNDNAPEIAISSITSPIPENS
PETVVMVFSIRDRDSGDNGRMICSIPEDLPFMLKSSVENYYTLETEKMLDRESQAEYNIT
ITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDS
GANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRGSPA
LSSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVRDNGEPPRSASVTLHV
LLVDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAA
SAGRCSGPEGHFPGHLVDVSGTGTLSQSYQYEVCLRGGSGTNEFKFLKPIIPNLPPQCSG
KETEENPTFRNSFGFNI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggaagagcagacactctgcagataaggcaagtcctgcttctctttgttttg
ctaggaatatctcaggcgggttccgagtctgggcgcttttctgtggcagaggaaatgcag
agtgggagctttgtaggcaacttggcaaaggacctgggagtagaagtgggtgagctgttc
tcaaggggggctcaggtggtctctaatgataacaaaaaccgtttgcagctggacaaaaac
accggggatttgctcttaagcgaatcgctagaccgggaggagctctgtggctccactgag
ccttgtgtgctgcatttccaggtattaatgaaaaaccctttgcagtttttacgcattgag
ctccaggtcacggacataaatgaccactctcccatattcttagaaaaagaaatgctccta
gaaatcccagagaatagtcctgttggtgctgtgttcttactagaaagtgcgaaggattta
gatgtaggaatcaatgctctgaagaactacatgataagccccaactctcatttccacatt
aaaatacgagtcaatccggacaataggaaatacccagagttggttctggacaaggcactg
gattatgaagagcagtcggagctcagtttcatccttactgctctggatggtgggtctcca
cctaggtctgggactgcaactgtccgggtggtggttgtggacattaatgacaactccccc
gagtttgagcaaccattttatgaggtgaagattccagagaatagcatattaggctcactc
attgtcaccgtctcagcttgggatttagactcaggaaaaaatggagaaatatcatattct
ttctcccatgcctcagaagatattcgcaagacatttgaaattaatcaaaagtctggagaa
gtcagtttaacagcatccatggattttgaaacaattgaatcatattcagtaatcattcaa
gctacagatgggggaggtctctttggaaaatcaacagtcagaattcaggtgatggatgtg
aatgacaatgctcctgaaatagccatatcgtcaattaccagtccaatcccagaaaattcg
cctgagactgtggttatggtttttagcatccgagacagagactctggggacaatgggagg
atgatttgttctatcccagaagacctccctttcatgctaaaatcttcagttgagaattat
tacactttggaaacggagaaaatgctggatagagagagccaggccgagtacaacatcacc
atcaccgtcaccgacttagggacccccaggctgaaaacgcagcacaacataaccgtgacg
gtctccgacgtcaacgacaacgcccccgccttcagccaaaccacctacaccctgcgcgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccacggatagggactcg
ggcgccaacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctg
gcctccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggat
tacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcg
ctcagcagccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttc
gtgctgtacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctg
gtggtgctggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctcccggaggtggcggcggccgag
gcgcgggccgacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctc
ttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcg
tctgcgggtcgctgctcggggcccgagggccactttccgggccacctggtggacgtcagc
ggcacggggacgctgtcgcagagctaccagtacgaggtgtgtctgcggggaggatctgga
accaatgaattcaagttcttgaagccgattatcccgaacctcccaccccagtgctctggg
aaagaaacggaagaaaatcctaccttccgcaatagctttgggttcaatatatag
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