Lynx rufus (bobcat): 124527744
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Entry
124527744 CDS
T08475
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124527744
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124527744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
124527744
NCBI-ProteinID:
XP_046956921
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MEAEEERFPRLRQVLLLFVLLAHTCAEREDYFITEETESGSFVANLAKDIGLGARELSRR
RARIIFNNDKKHFQLNLQTGDLQVNEKLDREELCGPTEPCVLQFQVLLEEPLEVYRYKLL
VTDINDNSPVFPEAEMILKIMENTLPGAVFPLKNAQDLDVGVNNVQNYTIYPNSHFHVLT
RNSGEGRKYPELVLDKALDREQQPEFRLTLMAVDGGTPPKTGTTLVLIDVLDINDNAPEF
VQPLYRVQILENSPLGSLIVTVSARDLDTGINGEVVYSFFYGDEEITRTFALNELTGEIK
IIRKLDFEKIKSYELDIKASDGAGLSGKCTVIIEVVDINDNTPEMTVASLISSIPENSPE
TTIALFSIQDPDSGENGRMVCSIQEDVPFTLKHSVENFYKLVTEGVLDRETRSEYNITIT
VTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSGA
NAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRGSPALS
SQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAWL
SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVRDNGEPPRSASVTLHVLL
VDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAASA
GRCSAPEGHFPGHLVDVSGAGTLSQSYQYEVCQERIWDQGI
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaagaggagcgttttcctagactaaggcaagttcttcttctctttgttttg
ctggctcacacttgcgcggagcgggaagattattttattacagaagaaacagagagtggt
tcttttgtggccaatctagcaaaggatatagggctaggggcaagagagctctctcggcgg
agggctcggatcatttttaacaatgacaaaaagcattttcagctgaaccttcagactgga
gatttacaagtaaatgagaaactggatcgggaagaattgtgtggccccactgaaccttgt
gtactgcaatttcaagtgttactggaagaacctttggaggtatataggtataagcttttg
gtcactgacataaatgacaattcccctgtgttcccagaggcagaaatgattttaaaaatc
atggaaaatactcttccaggcgctgtgtttcccctgaaaaatgcgcaagatttggatgta
ggtgtcaataatgttcaaaactacaccatttatcccaactcccatttccacgtgctcacc
cgcaacagcggtgaaggcagaaaatacccggaactggttctggacaaagccctagatcga
gaacagcagcccgagtttagattaactctcatggcagtagatggtggaactcctcccaaa
actgggactaccctggtcctcattgatgttttggacatcaatgacaatgctcctgagttt
gtgcagccactctatcgtgtgcagatcctggaaaacagtcccctgggatctcttattgtc
actgtttccgctagagatttagacacaggaataaacggtgaagtagtctattcatttttc
tatggcgatgaagagattactaggacatttgcacttaatgaactcacaggagaaattaaa
ataattaggaaattagattttgaaaaaattaagtcatatgagctggatattaaggcttct
gatggggcaggtctttcgggaaaatgcactgtcataatagaggtggtggatataaatgac
aacaccccagaaatgacggtggcttcccttataagttccatccctgaaaattcccctgag
accacgatagctcttttcagtattcaagacccagactctggggaaaatgggaggatggtt
tgttccatccaggaagatgtgccgttcactctgaaacattctgttgaaaatttctacaag
ttagtaacagaaggagtgctagacagagagacaagatctgagtacaacatcaccatcacc
gtcaccgacttggggacccccaggctgaaaacgcagcacaacataaccgtgacggtctcg
gacgtcaacgacaacgcccccgccttcagccaaaccacctacaccctgcgcgtccgcgag
aacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcgggcgcc
aacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctggcctcc
ctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggattacgag
gcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcgctcagc
agccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtgctg
tacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggccgaggcg
ggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctggctg
tcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaacggc
gaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctggtggtg
ctggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtgctgctg
gtggacggcttctcgcagccctacctgccgctcccggaggtggcggcggccgaggcgcgg
gccgacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctcttcctg
ttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcgtctgcg
ggtcgctgctcggcgcccgagggccactttccgggccacctggtggacgtcagcggcgcg
gggacgctgtcccagagctaccagtacgaggtgtgtcaggagaggatctgggaccaagga
atttaa
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