Lynx rufus (bobcat): 124527766
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Entry
124527766 CDS
T08475
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124527766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124527766
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124527766
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124527766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
124527766
NCBI-ProteinID:
XP_046956923
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSSQHPQSPAVPPSYPSGPPPAASALSTAPGNNGASTPAAPSSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGSSTTQPRPPSVQPGGGGGGGGSSNSSGGAGTGKQNGA
TSYSSVVADSPAEVALGSSGGNSASSQALGPPSGPHNPPPSTTKEPSAAAPTGAGGVAPG
SGNNTGGPSLLVPLPVNPPSSPTPTFSEAKAAGALLNGPPQFSTAPEIKAPEPLSSLKSM
AERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVP
LTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRL
STETLFFIFYYLEVQQGPRGSLGPPGFAATAAVPPSGWRGEGTKAQYLAAKALKKQSWRF
HTKYMMWFQRHEEPKTITDEFEQVRAPPCAPPCLRAGPPPTPSPAASSVPGALTSTWTTV
LFILPATGSSPLGAQPNRLPGGEPFPAPRSMPLPGTCSGTVARVASPTSEHRSLHTGRSA
VGLLPLLSPHTGQSGGLTSKHGWGNRFI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagttcgaagacatttggcagaagctccacaatgcagccaacgcgaaccag
aaagagaagtatgaggctgacctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcatcgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagacc
aaagcctacagcaaggagggcctgggcctggcacagaaggtggaccccgcccagaaggag
aaagaggaggttggccagtggctcacgaataccatcgacaccctaaacatgcaggtggac
cagtttgagagtgaagtggagtccctgtcggtgcagacacgcaaaaagaagggtgacaag
gatcagaagcaggaccggatcgagggcctgaagcggcacatcgagaaacatcgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaatgactccatccttgtggatgcc
atccgcaagatcaaggacgacgtcgagtactatgttgactcgtcccaggaccccgacttc
gaggagaacgagtttctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagtcacatggaggatgagatcttcaaccagtccagcagc
acacccacctccaccacctccagctctcccatcccacccagcccggccaactgcaccaca
gaaaactctgaggatgacaagaagagggggcgctccacggacagtgaagtcagccagtct
ccagccaaaaatggctccaagcccgtccacagcagccagcaccctcaatccccagctgtg
ccgcccagctacccgtctggccccccgcccgccgcctccgccctgagcaccgcccctggc
aacaacggggcctccacgccagcagcgccctcaagtgccctgggtcccaaggccagccca
gctcccagccacaattcaggcacccccgccccctatgcccaggctgtggccccaccggcc
cccagtgggtccagcaccactcagccccggccccccagcgtccagcccggtgggggaggg
ggcggcggaggcagcagcaacagcagcggaggggcaggcaccggcaagcagaacggtgcc
accagttacagctcggtggtggcagacagcccggccgaggtggctctcggcagcagtggg
ggcaacagtgccagcagccaggccctgggccccccgtctggcccccacaacccccctccc
agtaccacgaaggaacccagtgcggcagccccaacaggggctgggggtgtggccccaggc
tcagggaacaacacagggggtcccagcctcctggtgccgcttcctgtgaacccccccagt
tctccgacacccaccttcagcgaggccaaggcagctggcgccctgctcaacggaccccca
cagttcagcaccgccccggagatcaaggctcccgagcctctgagctctcttaagtccatg
gcagagcgggcagccatcagctccggcatcgaggaccccgtgccaacgctgcacttaacc
gagcgagacatcatcttgagcagcacgtctgcgcctccagcctcagcccaaccacccctc
cagctgtcggaagtgaacatcccactgtcactgggggtgtgtccactggggcccgtaccc
ctcaccaaggagcagctgtaccagcaggccatggaggaggccgcctggcatcacatgccc
cacccctcagactccgagcgcatccggcagtacctccctcggaacccctgcccgacgccc
ccctaccaccaccagatgccacccccacattcggacaccgtggagttctaccagcgcctg
tccaccgagaccctcttcttcatcttctactatctggaggtacagcagggcccccggggc
agcctcgggccccccggcttcgccgccaccgccgccgtccccccctcgggctggaggggt
gagggcacgaaggcacagtacctggcagccaaggccctgaagaagcagtcctggcgattc
cacaccaagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgatgag
tttgagcaggtgagggcccctccctgtgccccgccctgcctgcgggccggcccccctccc
acaccctcacctgcagccagctctgtcccgggggccctcacctccacctggaccactgtc
ctcttcatcctgcccgccactggctcgtcacccctcggggcccagcctaaccgtctgccc
ggaggggagcctttcccagccccaaggtccatgcctctgccgggcacctgctcaggcacg
gtggcacgtgtggcttctcccacctctgagcacaggtcgcttcacacagggcgctcggcg
gtcggtctccttcccctcctgtccccccacaccgggcagagcgggggactcactagcaaa
cacggatggggaaaccgttttatttaa
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