KEGG   Lynx rufus (bobcat): 124527821
Entry
124527821         CDS       T08475                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03030  DNA replication
lruf03410  Base excision repair
lruf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124527821
   03410 Base excision repair
    124527821
   03420 Nucleotide excision repair
    124527821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lruf03032]
    124527821
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124527821
Enzymes [BR:lruf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124527821
DNA replication proteins [BR:lruf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    124527821
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      124527821
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N Sigma70_ner
Other DBs
NCBI-GeneID: 124527821
NCBI-ProteinID: XP_046957022
LinkDB
Position
Unknown
AA seq 2285 aa
MVLRNSGRRRAEPGAGGEASRDDGPSSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVRVRKDISPAVRKSREQ
GHASDAYTAMLSSVLQGGSVVVDEEEASKKVTDQLDNIVDMREYDVPYHIRLSIDLKIHA
AHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDVGDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQEAKPTIMV
TYNGDFFDWPFVEARAAIHGLSMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAVVDEATCAACDFNKPG
ADCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTAEGPARAFHELSREEQAKYEK
RRLSDYCRKAYKKIHVTRVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKKPKVTISYPGAMLNIM
VKEGFTNDQYQELTEPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPMVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDICKQKKISELFVLEGRRQVGVAQA
PEGTQSLGAPDMEDLGLAKPPRSVVPVATRRKRVLWESQGESQDLELTVPWQEILGPPPA
LGTTQEEWLVWLRFHKKKWQLQARQRLGRKKRRRLEVAEGDPRPGAVRDRPATGLGGFLR
RAARSILDLPWQIVQISETSQAGLFRLWAVISSDLYCIRLNIPRQFYVNQRVAKAEEGPS
YRKVSRVLPRSNVVYNLYEYSVPEDMYQEHVNEINTELSAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKQLVRHLSGREAETFALEHLEMRSLAQFSYLEPGSIRHLYLYHHAQGHKALF
GLFVPSQRRASVFVLDTVRSNQMPSLSALYTAEHSLLMEKVGPELLPPPKHTFEVRAETD
LKTICRAIQRFLLAYKEERRGPTLIAVQSNWELKRLAGEVPVLEDFPLVPVRVADRVSYG
VLDWQRLGARRMIRHYLNLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTARPDLGGKEADDNRLVMEFDDQASVEINCPGCYSTLCVELDIQNLAVNTIL
QSHHINDMEGADSVGISFDVIQQASLEDMITGNQAAGTPASYDETALCSSTFRILKSMVV
GWVKEITQYRNIYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKLFLQLIAEFKRLG
SSVVYANFNRIILCTKKRRVADAIAYVEYITNSVHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGNVPSSIHCGQQDSQKEGREEEEEEEEEEGGEEEEEEEGAQEPDVEDMLENNWN
IVQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSVPGSTPLRRRGPSQLSQEAQAVA
GALPGVITFSQDYVANELTQNFFTITQKIQKKVTGSRNATELSKMFPVLPGSHLLLNNPA
LEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSC
NFCRDLDLCKEPSFSQDGAVLPQWLCSNCLVAYDSSVIEMALVEAVQKKLMAFTLQDLIC
LKCQGVKETNMPVYCSCAGDFALTIRTKVFMDQIRIFQNIAQHYGMSYLMETLEWLLQKN
LQLGH
NT seq 6858 nt   +upstreamnt  +downstreamnt
atggttctgaggaacagcgggcggcggcgcgcggaaccgggcgcgggcggcgaggccagc
cgggacgatggcccctcttcctctgtctcggcacttaagcgcctggagcgcagtcagtgg
acagataagatggatttgcggtttggttttgagagactcaaggagcctggtgagaagacg
ggctggctcatcaacatgcaccctaccgagattttagatgaagataaacgcctggtcagt
gcggtggattactactttattcaagatgacgggagcagatttaaggtggccttgccctac
aagccatatttctacattgcaaccagaaagggttgtgagcgagaagtttcatcttttctc
tccaagaagtttcagggtaaaattgctaaagtagagactgtccccaaagaggatctggac
ttgccaaatcacttggtgggtttgaagcgaaattacattaagctgtccttcaacacggtg
gaggaccttgtcagagtgaggaaggacatctcccctgccgtgaggaagagccgggagcag
ggccacgccagtgatgcctacacagctatgctgtccagtgttctgcaagggggcagtgtg
gttgttgatgaagaggaagcctctaagaaggtcactgaccagttggacaacatcgtggac
atgcgagagtatgatgtgccctatcacatccgcctctccattgacctgaagatccatgcg
gctcactggtacaacgtcaggtaccgaggaaatgccttccctgtggaaatcacccgccga
gatgaccttgttgaacgacccgaccctgtggttttggcatttgacatcgagacaaccaaa
ctgcccctcaagtttccagatgctgagactgaccagattatgatgatttcctatatgatt
gacggtcagggctacctcatcaccaatagggagatagtgtcagaggacgttggagatttc
gagttcacccccaagccagagtatgagggacccttctgtgtcttcaatgaacccgacgag
gttcatctaatccagaggtggtttgaacacgtccaagaggccaaacccaccatcatggtc
acctacaatggggacttttttgactggccgtttgtggaggccagagcggcgatccatggg
ctgagcatgtaccaggagatagggttccagaaggacagccagggggagtataaggcatcc
cagtgcatccacatggactgtctcaggtgggtgaagagggacagttacctgcctgtgggc
agtcacaacctcaaggcggctgccaaagccaagttgggctacgaccccgtggagctggac
cctgaagacatgtgccggatggccaccgagcagccccagactctggccacatactcggtg
tcagacgcggtggccacgtactacctgtacatgaagtacgtccaccccttcatattcgcc
ctctgcaccattatccccatggagcctgacgaggtgctgcggaagggctccgggacgctg
tgtgaggccttgttgatggtgcaggccttccatgccaacatcgtcttccccaacaagcag
gagcaggagtttaacaagctgaccgatgatggccacgtgctggatgccgagacctatgtg
ggtggccacgtggaggccctggagtcgggcgtgttccgcagtgacatcccctgccggttc
aggatgaatcctgccgcctttgacttcctgctgcagcgggtggagaagaccatgcgtcat
gccatcgaggaagaggagaaggtgcccatggagcaggtcaccaacttccaagaggtgtgt
gatcagattaagaccaagctcacctccctgaaagatgtcccaaacagaatcgagtgtccc
cttatctaccacctggatgtgggagccatgtaccccaacatcatcctgacgaaccgcctg
cagccctctgccgtggtggacgaggccacctgtgccgcctgtgacttcaacaagcctgga
gcagactgccagaggaagatggcctggcagtggaggggcgagttcatgccagccagtcgc
agcgagtaccatcggatccagcaccagctggagtcagagaagttccctcccttgactgca
gagggcccagcccgggcctttcacgagctgtcccgcgaggagcaggctaaatatgagaag
cggaggctgtcagattactgccggaaggcctacaagaagatccacgtgaccagggtggag
gagcgcctcaccaccatctgccagcgggagaactccttctatgtggacacggtgcgcgcc
ttccgggacaggcgctatgagttcaagggtctccacaaggtgtggaagaagaagctgtct
gcggccgtggaggtgggcgacgccgccgaagtgaagcgctgcaagaacatggaggtcctg
tacgactccctgcagctggcacacaagtgcatcctgaactccttctacggctacgtcatg
cgcaaaggggctcgctggtactccatggagatggcaggcattgtctgcttcacgggagcc
aacatcatcacccaggcgcgggaactgatcgagcagatcgggaggcccttagagctggac
acagacggaatatggtgcgtcctgcccaacagcttccctgaaaactttgtcatcaagacg
accagtgtaaaaaaacccaaggtgaccatctcctaccctggggccatgttaaacatcatg
gtcaaggaaggcttcaccaatgatcagtaccaggagctgactgagccagcctcacttacc
tatgtcacccgctcagagaacagcatcttttttgaggttgatggaccctaccttgccatg
atccttccagcctccaaggaagagggcaagaaactgaagaagagatatgctgtcttcaac
gaggacggttccctggctgagctaaagggcttcgagatcaaacgccggggggagctgcag
ctgattaaaatcttccagtcctcagtgtttgaggccttcctcaagggcagcaccctagaa
gaagtgtatggctccgtcgccaaggtggctgactactggctggacgtgctgtacagtaag
gccgcgaacatgcctgattctgagctgtttgagctgatatctgagaaccgctccatgtct
cggaagctggaagattatggggagcagaagtccacgtctatcagcacagccaagcgcctg
gctgagttcctgggggatcagatggtgaaggacgcggggctgagctgccgctacatcatc
tcccggaagcccgagggctctccagtcacagagagggccatcccactcgccattttccag
gcagagcccatggtgaggaagcattttctccggaaatggcttaagagttcttccctccaa
gacttcgatattcggacaatcctggactgggactactacattgagcggctagggagtgcc
atacagaagatcatcacaatccctgcggccctgcagcaggtgaagaacccggtgccacgc
gtcaagcaccctgactggctgcacaagaaacttctggagaagaatgacatctgcaagcag
aagaagatcagtgagctttttgtcctcgaaggccggagacaggtgggcgtggcccaggct
ccagaaggcacacagagccttggtgctccggacatggaagacctcggcctggcaaagcca
ccgcgctcagtggttcctgttgccaccaggaggaagcgtgtcctctgggagagccagggg
gagtcgcaggacctggagctgacggtgccctggcaggagatcttggggccgcctccggcc
ctcgggaccacgcaggaagagtggctggtctggctccgattccacaagaagaagtggcag
ctgcaggcccggcagcgcctgggtcgcaagaagaggcggcgtctggaggtggcagagggc
gaccctcggcctggggctgtccgcgacaggcctgccaccgggctggggggcttcttgcga
agagccgcccgcagcattttggaccttccgtggcagatcgtgcagatcagtgagaccagc
caggccggcttgttcaggctgtgggccgtcatcagcagtgacttgtactgcatcaggctg
aacatcccccgccagttctatgttaaccagcgggtggctaaagccgaggaggggccttca
taccgcaaggtcagtcgagtgcttcctcgctccaacgtggtctacaacctctacgagtac
tcggtgcccgaggacatgtatcaggaacacgtcaacgagatcaatactgaattgtcggcc
ccagacatcgagggcgtgtacgagacacaggttccgttattgttccgggccctggtgcag
ctgggctgcgtgtgtgtggtcaataaacagctggtgagacacctttcaggccgagaagca
gaaacctttgctctcgagcacctggagatgcgctctctggcccagttcagctacttggaa
ccagggagcatccgccacctctacctgtaccaccacgcgcaaggccacaaggcgctcttt
ggtctgtttgtgccctcccagcgcagggcgtctgtgttcgtgctggacaccgtgcgaagc
aaccagatgcccagcctcagcgccctgtacaccgccgagcacagcctcctgatggagaag
gtgggccccgagctcctgcctccccccaaacacacttttgaagttcgggctgaaaccgac
ttgaaaaccatctgcagagccatccagcgcttcctgctggcctacaaggaggagcgccgt
gggcccacactcatcgctgttcagtccaactgggagctgaagaggctggctggcgaggtg
cccgtcctggaggacttcccgctggtgccggtccgcgtggctgatagggtcagctatgga
gtcttggactggcagcgcctcggtgcccggcgcatgatccgccactacctcaacctggac
acctgcctgtcccaggccttcgagatgagcaggtacttccacatccccattgggaacctg
cccgaagacatctccaccttcggctccgacctcttctttgcccgccacctgcagcgccac
aaccacctgctctggctgtcccccacggcgcgccctgacctgggcggcaaggaggccgac
gacaatcgcctcgtcatggagttcgacgaccaggccagcgtggagatcaactgtccgggc
tgctactccacgctgtgcgtggagctggacatccagaacctggccgtcaacaccatcttg
cagtcccaccacatcaatgacatggagggggctgacagcgtgggcatcagcttcgacgtg
atccagcaggcctccctggaggacatgatcaccggcaatcaggccgccggcaccccggcc
agctacgatgagacggccctctgctccagcacgttcaggatcctgaagagcatggtggtg
ggctgggtgaaggagatcacacagtaccgcaatatctacgctgacaaccaggtgatgcac
ttttaccgctggctccggtccccatcctcgctgctgcacgaccccgccctgcaccgcacg
ctccacaacatgatgaagaagctcttcctgcagctcatcgctgagttcaagcgcttgggg
tcctctgtcgtctatgccaacttcaaccgcatcatcctctgcacgaagaagcggcgggtc
gcagacgccattgcctacgtggagtacatcaccaacagcgtccattctaaagagatcttc
cattccttgacgatttctttctctcggtgctgggagtttcttctctggatggatccctct
aactatggtggaatcaaaggaaacgtcccatctagtattcactgtggacagcaagactcc
caaaaagaaggcagagaagaggaggaggaggaggaggaggaggaaggtggggaggaagag
gaggaggaggaaggtgcccaggagcccgacgtggaggacatgctggaaaacaactggaac
atcgtgcagttcctgccacaggcagcctcctgccagagctacttcctcatgatcgtttcg
gcatacattgtggccgtgtaccacagcatgaaggaggagctgaggcgcagtgtcccgggg
agcacccccctgcggaggagggggcccagccagctctcccaagaggcccaggcggtggcc
ggagcccttcctggagtgatcaccttctctcaagattacgtggcaaatgaactcactcag
aacttcttcaccatcactcagaagattcagaagaaagtcacgggttcccggaacgccact
gagctctcaaaaatgttccctgtcctccctggttctcacttgctgctcaataaccctgcg
ctggagttcatcaaatacgtgtgcaaggttctgtctctggacacgaacatcacgaaccaa
gtgaacaagctgaaccgggacctgctgcgcctggtggacgttggcgagttctcagaggag
gcccagttccgagacccctgccgttcctacgtgctccctgaggtcatctgccgcagctgt
aacttctgccgggacctggacctgtgcaaagagccctccttctctcaggacggggctgtg
ctgcctcagtggctctgctccaactgcctggttgcctacgactcatcagtcatcgagatg
gccctggtggaagccgtgcagaagaaactgatggccttcactctgcaggacctgatctgc
ctcaagtgccagggtgtgaaggagaccaacatgcctgtgtactgcagctgtgccggggac
ttcgccctcaccatccgcaccaaggtcttcatggaccagattagaatcttccagaacatc
gcccagcactatggcatgtcgtacctcatggagaccctggagtggctgctgcagaagaac
cttcagctgggccattag

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