Lynx rufus (bobcat): 124528114
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Entry
124528114 CDS
T08475
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124528114
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124528114
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124528114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
T2SSE
AAA_30
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
124528114
NCBI-ProteinID:
XP_046957438
LinkDB
All DBs
Position
Unknown
AA seq
2202 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVADLKVKRSKLHEQIVDLDVTWKKIVKFLNEKLEK
SEMQSVNEDLKDILQAAKQIVGIDNGKEAIESAAAFLFKTFHLKDSVGHKETKAIKQMFG
PFPSSSATAACNATNRIISRFRQDNLTALIQMTEEEYGDRVLFGKNLAFSFDMHDLDHFD
ELPINGEPQKTISLDYKKFLNEHFQEQSTPELKPVEKTNDSFLWCEVEKYLNATLNEMAE
ATRIEDLCCTLYDMLASVKSGDELQNELFELLGPDGLELIEKLLQNRITIVDRFLNSSND
HKLQALQDNCKKILGENAKPNYGCQVTIQSEQEKQLMKQYRREEKRIARREKKAGEDGEI
AEGVMCFDPKELRIQREQALMNARSVPILSRQRDMDVEKIRYPHVYDSQAEAMRTSAFIA
GAKMILPEGIQRENNKMYEEVKIPYSEPMPVGFEEKPVYIQDLDEIGQLAFKGMRRLNRI
QSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMK
ALAAEMTNYFSKRLEPLGIVVKELTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVA
LSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATF
LHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAGHQVMV
FVHARNATVRTAMSLIERAKNSGQISCFLPTQGTEYGHAEKQVQKSRNKQVRELFPDGFS
IHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVD
LGILDVMQIFGRAGRPQFDRFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNA
EIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQIDPTLAKHREQLVVEVGRK
LDKARMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTESDIFAIVSKAEE
FDQIKVREEEIEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDSA
YVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTR
LEEKNLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVTL
SICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFIVLKKQVISKEAQLLVFTIPIF
EPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITALGCEAYEA
LYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAP
LKALVRERMDDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQN
RNYVKQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLA
DWLNIHQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI
FVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREMENIIGTLRDSNLKLTLAFGIGMHH
AGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPI
TDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIA
GGTITSKQDAMDYITWTYFFRRLIMNPSYYNLSDVSHDSVNKFLSSLVEKSLVELELSYC
IEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTEELLSILSDAEEYTDLPV
RHNEDHMNSELAKSLPFESNPHSYDSPHTKAHLLLQAHLSRTMLPCPDYDTDTKTVLDQA
LRVCQAMLDVAANQGWLVTALNITNLVQMVIQGRWLKDSSLLSVPNIEHHHLHIFRKWST
GTKGGRTGCHGFIECLPELLHACGGKDHVFSSMMENELTAVKMKQAWNFLSHLPVIDVGL
SVKGWWDDSVEGHGELSITTLTSDKRNDNRWIKLHADQEYVLQVSLQRVHFGFHKGKQDS
HAVTPRFPKLKDEGWFLILGEVDKRELIALKRVGYVRNHHVVSISFYTPELPGRYIYTLY
LMSDCYLGLDQQYDIHLNVTPASISAQVNEEVSDALIDLKVK
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggctttacctcgtctcacaggagctttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtggctgacttaaaggtgaagcggtctaaacttcatgaacaaatt
gtagacttggatgttacatggaagaagatagtaaaatttttgaatgaaaaactggagaag
agtgaaatgcaaagtgtaaatgaagacttaaaagatatattgcaggctgcaaaacaaata
gttggaatagataatggtaaagaagcaattgaaagtgcggctgcatttctcttcaagaca
tttcacttgaaggactctgtcggtcacaaggagacaaaggctatcaaacagatgtttggt
ccttttccatcatcatctgccactgcagcttgtaatgctactaatcgaattatttctcgt
tttcgtcaagacaatcttactgctcttatccagatgacagaagaagaatatggtgataga
gttttatttggtaaaaatttagcattttcatttgacatgcatgatttggaccactttgac
gaactgccaataaatggtgaaccccagaaaactataagccttgattataagaagtttctg
aatgaacattttcaggagcagtctacaccagagctcaagcctgtggaaaaaacaaacgac
tcctttttgtggtgtgaagttgagaagtacttaaatgcaactttaaatgaaatggctgaa
gcaacaagaatagaagatctttgctgtaccttatatgatatgcttgcttctgttaaaagt
ggtgatgaacttcagaatgagctatttgaactgctgggacctgatggacttgaacttatt
gagaaactcctccagaacagaattacaattgtggatagatttcttaattcttcaaatgat
cataagttgcaggctcttcaagacaattgcaaaaaaattttaggagaaaatgctaaacct
aactatggttgtcaagttaccattcagtctgaacaagaaaagcaattaatgaaacagtat
cgtcgtgaagaaaaaagaattgccagacgagaaaaaaaggctggagaagatggagaaatt
gcagaaggagttatgtgctttgatcctaaggaattgcggatacaaagagagcaggcactt
atgaatgctagaagtgttccaattctgagtaggcagagagacatggacgttgaaaaaata
cgttatccccatgtttatgattcccaggctgaagccatgagaacatcagcattcattgct
ggtgcaaagatgattttaccagaaggaattcaaagagagaataacaagatgtatgaagaa
gtaaagattccctatagtgaaccaatgccagttggctttgaggaaaaaccagtttatatc
caagacttagatgagattgggcagctggcttttaaaggaatgaggagactcaatagaatc
cagtcaattgtgtttgagactgcctacaacaccaatgagaacatgctgatttgtgcccct
actggggctggaaagaccaacattgcaatgcttacagttctgcatgaaattcgccaacat
tttcaacaaggtgttatcaaaaagaatgaatttaagattgtatatgttgctccaatgaaa
gccttggcagctgaaatgacaaattacttcagcaaacgtctagagccactgggcatcgtt
gtgaaagaattgactggggatatgcagttgtcaaaaaatgaaattttacgaactcagatg
cttgttaccacaccagaaaaatgggatgtagtgacaagaaagagtgttggagacgtagct
ctttcccaaattgtaaagctccttattcttgatgaagttcatttgctgcatgaagataga
ggaccagtattagaaagcatagtggcacgtactttacggcaggtggaatccacacagagt
atgataaggattcttgggctctctgcgaccttacccaactaccttgatgttgctacattt
ttacacgttaatccctgtattggacttttctactttgatggccgttttcgaccagttcct
cttggacagacatttctgggagttaaaagtgcaaataaggtgcaacaattgaataacatg
gatgaagtatgttatgaaagtgttttgaagcaagtaaaggctggacaccaggtgatggtg
tttgtgcatgctcgaaatgctactgtaagaacagctatgtctctaatagaaagagcaaaa
aatagtggtcagatttcctgctttttacctacccaaggaactgaatatggacatgcagaa
aaacaggtgcagaagtcaagaaacaaacaagtacgagaattatttccagatggttttagt
attcatcatgcaggaatgcttcggcaggacagaaacttggttgaaaatttgttttctaat
gggcatatcaaagttctagtctgtacagctacattagcctggggtgtcaatcttcctgct
catgctgttattattaagggaacacaaatatatgctgcaaaaagaggctcttttgttgac
cttggaattttagatgtcatgcagatatttggtcgagctggaagaccacaatttgacaga
tttggagaaggaatcatcataacaacacatgacaaactcagccattacctcactttgctc
actcaacaaaacccaattgagagtcagtttctggaaagccttgcagataacctaaatgca
gagattgctctgggaacagttactaatgtggaagaagcagtgaagtggataagttacact
tatctttatgtacggatgagagcaaatccattagtatatggcatcagtcacaaggcttat
cagattgacccaacattagcaaagcaccgagaacagttggtcgttgaagttggacgaaaa
ctagacaaagctcggatgattcgttttgaagagcgaactggatatttttcctcaactgat
ttgggtagaactgctagccactactatattaagtacaacaccattgagaccttcaatgaa
ctctttgatgctcacaaaacagaaagtgatatttttgctatcgtctccaaagctgaagaa
tttgatcaaatcaaggtcagagaagaggaaatagaagagctagatgccttattaaacaat
ttctgtgaactctcggctcctggaggtgtagagaacagttatgggaaaataaacatccta
cttcaaacttatatcagccgaggagagatggacagtttctcccttatatcagattctgca
tatgttgcacagaatgcagctagaattgttcgtgctctttttgaaattgctctgaggaaa
cgttggcctgccatgacctacaggctcctgaatcttagtaaagtcattgacaagaggctt
tggggttgggctagccctttgagacagttttcagtgttaccaccacacattctaacaaga
ttagaagaaaaaaaccttactgtggataagctgaaagacatgaggaaagatgaaataggt
cacatgctgcatcatgtgaatattgggctcaaggtcaaacaatgtgttcatcagattcct
tctgttacaatggaagcatccattcagcccatcacacggactgtcctccgagtgacactc
agcatctgtcctgattttacttggaatgatcaggtccatgggacagtaggagaaccttgg
tggatttgggtagaagatcctacaaatgaccatatttatcattcagagtattttatagtt
ctaaaaaaacaggttattagtaaagaagctcaactactggtgtttacaatccctattttt
gagcctttgccttcccaatactacatccgagcagtgtctgatagatggttaggagctgag
gctgtatgcattatcaactttcaacatctgattctaccagagagacatcctcctcataca
gaattactggatcttcagcctttaccaatcacagctttgggatgtgaagcatatgaagca
ctatacaactttagccactttaaccctgtgcagacacaaatatttcataccctgtaccac
acagactgtaatgtcctccttggagcacccactggatcaggaaagaccgttgctgctgaa
ttagccattttcagagtcttcaacaagtaccctacttcaaaggcagtgtatattgcaccc
ttaaaagctcttgtacgtgaaagaatggatgattggaaagttagaatagaagaaaaactt
ggtaaaaaagttattgaactaaccggggatgtgactcctgatatgaaatccattgctaag
gctgaccttatcgtcactacaccagagaagtgggatggagtcagtagaagctggcaaaat
aggaactatgtgaagcaagtcactattctcatcatagatgagatccatctgcttggggag
gaaagaggccctgttctagaagtcattgtatctcgaacaaatttcatctcatcacacaca
gaaaagcctgttagaatagttggactatctactgcattagctaatgccagagaccttgct
gattggctcaacattcatcagatgggcttgttcaatttccgaccatcagtacgtccagtt
ccactggaagttcacattcaaggcttcccaggtcaacattactgtcctcgtatggctagt
atgaataagcctacatttcaagcaattagaagccattctccagccaaacctgttttgata
tttgtctcatcaagacgtcaaactcgtcttactgctttggaattgatagcttttctggct
actgaagaagatccaaagcagtggttgaatatggatgaaagagagatggagaacatcatt
ggaacgctaagagattccaacctgaagctgacacttgctttcggaataggaatgcatcat
gctggattacatgagagggaccgaaaaacagtagaggagctatttgtaaactgtaaagtt
caggttcttattgctacaagtacattagcctggggtgtaaactttccagctcacttagta
attattaagggaacagaatattatgatggaaaaacaaggcgctatgtggattttcccatt
acagatgtactccagatgatggggcgtgctggaaggcctcagtttgatgaccaaggcaaa
gctgtaattctggttcatgacataaagaaagacttttacaaaaaatttctttatgaacct
ttcccagtagagtcaagcttattaggagtgctctctgaccatttaaatgcagagattgct
ggtggtacaattacatctaagcaagatgcaatggattatatcacttggacttactttttc
cgacgtcttatcatgaaccccagctactacaatttgagtgatgtgagccatgattctgtg
aataaatttctgtccagtctggttgagaagtctctggttgaattggaactttcctactgt
attgaaattggagaggataatcggagcattgaacctctgacatatggccgcattgcctct
tactactatttgaagcaccaaacagttaaaatgttcaaagagcgtttgaaacctgaatgt
ggtactgaagaattgctttcaattctgagtgatgcagaagaatacacagatttgccagta
agacacaatgaagatcatatgaatagcgaactggcaaaatctcttccttttgaatcaaat
cctcattcatatgatagccctcacaccaaagcacatctcctactacaggcacatctcagc
agaaccatgctgccctgcccagattatgacactgataccaaaacagtcttggaccaagca
ctcagagtatgtcaggcaatgttggatgtggctgcaaaccagggctggctggtgactgcc
ctgaatatcaccaatctggttcagatggtgatccagggtcggtggttaaaagactcttct
cttctttcagtaccaaacatagaacaccaccatcttcacattttcaggaaatggagcaca
ggcacaaaaggcggacgtactgggtgccatggcttcatcgagtgccttcctgaattgctc
catgcctgtggagggaaggaccatgtattcagctcgatgatggaaaatgagctaacagct
gtaaaaatgaagcaggcatggaatttcttatcccacttgccggtgatagatgttggccta
agtgttaaaggctggtgggatgactcagtggaaggacatggtgaactttctatcacaact
ctgacttcagacaaacgaaatgacaacaggtggatcaaattgcatgctgatcaagagtat
gtgcttcaagtcagcttgcagagagtccacttcgggttccacaagggaaagcaagacagc
cacgcagttaccccccgatttcccaaattgaaagatgaaggatggtttttgatattagga
gaagtggataagagagaacttattgctttgaaaagagtgggatatgttcgaaaccatcac
gttgtttccatttctttttatactccggaactacctggaaggtatatctacacactgtat
ctcatgagcgactgctaccttggcctggaccagcagtatgacattcatctcaatgtcaca
ccagcgagtatttctgcccaggtcaatgaggaggtctctgatgccttgattgacctgaaa
gtgaagtaa
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integrated database retrieval system
