Lynx rufus (bobcat): 124528137
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Entry
124528137 CDS
T08475
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03320
PPAR signaling pathway
lruf04659
Th17 cell differentiation
lruf04919
Thyroid hormone signaling pathway
lruf04920
Adipocytokine signaling pathway
lruf04928
Parathyroid hormone synthesis, secretion and action
lruf05200
Pathways in cancer
lruf05202
Transcriptional misregulation in cancer
lruf05207
Chemical carcinogenesis - receptor activation
lruf05216
Thyroid cancer
lruf05222
Small cell lung cancer
lruf05223
Non-small cell lung cancer
lruf05226
Gastric cancer
lruf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
124528137
09152 Endocrine system
04920 Adipocytokine signaling pathway
124528137
03320 PPAR signaling pathway
124528137
04919 Thyroid hormone signaling pathway
124528137
04928 Parathyroid hormone synthesis, secretion and action
124528137
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124528137
05202 Transcriptional misregulation in cancer
124528137
05207 Chemical carcinogenesis - receptor activation
124528137
09162 Cancer: specific types
05226 Gastric cancer
124528137
05216 Thyroid cancer
124528137
05222 Small cell lung cancer
124528137
05223 Non-small cell lung cancer
124528137
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124528137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124528137
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lruf03310
]
124528137
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
124528137
Nuclear receptors [BR:
lruf03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
124528137
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
124528137
NCBI-ProteinID:
XP_046957478
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPPGLPLPPSAAPTLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcggcggcggcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccaggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagttcctccccgaatccccttccccagggggcccctcccccttctcctcct
ggcctacccctacccccttcagcagccccaacccttggaggttccggggccccaccccca
cccccgatgccaccccctccactgggctcccctttcccagtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggt
aaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactacggggtttacagc
tgtgagggctgcaaaggcttcttcaagcgtaccatccgtaaggacctgacctactcgtgc
cgggacaacaaggactgcacagtggacaagcgccagcgaaaccgctgtcagtactgccgt
tatcagaagtgcctggccactggcatgaagagggaggcggtacaggaggaacgtcagcgg
gggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcagagcttgccgtggagcagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccaaatgaccccgtgactaacatctgtcag
gcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacatttttct
tccttgcctctggatgaccaggtcatattgctacgggcaggctggaacgagctcctcatt
gcttccttctcccaccgatccattgatgtccgagatggcatcctcctcgccacaggtctt
catgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctgttcaatccagatgccaagggtctctccaaccccagtgaggtggag
gttctgagggagaaagtgtacgcatcactggagacctactgcaaacagaagtaccctgag
cagcagggacggtttgccaagctgctgctacgtcttcctgccctcaggtccatcggcctt
aagtgtctagaacatctgtttttcttcaagctcattggagacacccccattgacaccttc
ctcatggagatgcttgaggctccccaccagctggcctga
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