Lynx rufus (bobcat): 124528366
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Entry
124528366 CDS
T08475
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124528366
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
124528366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_13
SYCE1
AAA_29
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-GeneID:
124528366
NCBI-ProteinID:
XP_046957901
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MATPSRKTSTPSSLASKRALPRDPSSEVPSKRKSSAPPAPPPLPLQSSRPFVEGSIVRIV
MENFLTYDVCEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRG
CSKGMVEIELFRNSGNLTITREIDVAKNQSSWFINKKSTTQKVVEEQVAALNIQVGNLCQ
FLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLE
KMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLARDRVKEEVR
KLKEGQIPMTRRIEEIERQRYSLEARIKEKATDIKETSQKCKQKQDIIERKDKQIEELQQ
ALTVKQNEEHDRQRRISNTRKMIEDLQNELKTAENCENLQPQIDAITNDLRRIQDEKASC
EGEVIDKRGEKETLEKEKKSVGDNIVRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDKF
KQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQEDMEVFLKEIRDNKKLRVNA
VIAPKSSYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSFLCCHYHIHEVPVGTERTR
EKIERVIQETRLKQMYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEE
QLKEINRKLQAVEAGLIALYERNKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGS
LKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNFVKICTSLHIQKVDLILQNTTV
ISEKNKLESDYMAASSQLRLTEQHFIELDESRQRLLQKCKELMKRARQVCNLGAEQTVPQ
EYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVEEYTKRE
EEIEQLTEELKIKKVELDKYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVD
LHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRV
VDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHM
LEPNRWNLKAFQRRRRRITFTQPQ
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagtaggaagacgtcgaccccaagctccctggcctccaagagagctctc
ccgagagacccctcgtcggaggtcccgagcaaaagaaagagctcggccccgccggcgccg
ccgccactgccgctgcagtcgtccaggcctttcgtggaaggctcgatcgtccgtatcgtg
atggagaacttcttgacgtatgatgtctgtgaagtatctcccggacctcacttgaatatg
attattggagctaatgggacaggaaagtcgagcatcgtgtgtgccatttgtcttgggttg
gcaggcaaacccgctttcatgggacgggcagacaaggttggcttttttgtgaagagagga
tgttccaaaggaatggttgaaattgaattgttcagaaattctggaaatcttaccatcacc
cgtgaaattgacgtggcaaaaaatcagtcatcttggttcatcaacaaaaaatctacaacc
cagaaagtggtggaagagcaagttgcagccttaaatattcaagtgggcaatctttgccaa
tttctacctcaggataaagttggagaatttgctaaactgagtaaaattgaactccttgaa
gctactgagaagtccattggacctccagaaatgcacagataccactgtgaactcaaaaac
ttcagggagaaagaaaaacaactagagacctcgtgcaaagagaaaactgaatatctagag
aaaatgattcagaggaatgaaagatataaacaagatgtggagagattctatgaacgtaag
cgacatttagatttgatcgagatgcttgaagcgaaaagaccatgggtggaatatgaaaat
gtccgtcaggagtatgaagaagtaaagctagctcgagaccgagtgaaggaagaggtcaga
aaactgaaagaagggcagatccctatgacacgccgaattgaagaaattgagaggcagcgt
tacagtttggaggctcgaatcaaagagaaggcaacagatattaaagagacatctcaaaaa
tgcaaacaaaagcaagatattatagaaaggaaagataaacagattgaggaactgcagcag
gctttaacagtaaaacagaatgaagaacacgatcgccagaggaggataagtaacactcgg
aagatgatcgaagatttgcaaaatgaactgaagaccgcagaaaactgtgagaatcttcag
ccccaaattgatgccatcacaaatgatttgagacgaattcaagatgaaaaggcatcatgt
gaaggcgaggtgatcgataagcgaggagagaaggaaaccctagagaaggagaaaaagagc
gtgggtgataatattgtacgatttgacaatcttatgaatcaaaaggaagataagctgaga
cagagataccgtgacacatatgatgctgttttatggctaagaaataaccgggacaaattt
aagcaaagggtctgtgaacctataatgctcacgatcaatatgaaagataataaaaatgcc
aaatatattgaaaatcatatttcatcaaatgacttaagagcttttgtatttgaaagtcaa
gaagatatggaggttttcctcaaagagattcgtgacaataaaaaattaagagtaaatgct
gttattgctcccaagagttcatatgcagacaaagccccttcaagatctctgaatgacctc
aaacagtatgggtttttctcttacttgcgagagttatttgatgcacctgatcccgtcatg
agctttctttgctgccattatcatattcatgaagttcctgtaggaactgaaaggaccaga
gaaaaaattgaacgggtaatacaagaaacccggttaaaacaaatgtacacagcagaagaa
aagtacgtggtgaaaacttccttttattcaaacaaagttatttctagcaacacatccctg
aaagtagcccagtttctcacagtcaccgtggacctagagcaaagaagacacttagaagaa
cagctaaaggaaattaatagaaaactgcaagccgtggaagcagggctgattgccctgtat
gagagaaacaagcatctagaacacaaagacaatgaacttagacagaagaagaaggagctt
cttgaaaggaaaaccaagaaaagacaactggagcaaaaaattagttccaaactaggaagt
ttaaagctgatggaacaggatacttgcaaccttgaggaggaagagcgaaaagcaagtacc
aaaataaaggaaatcaatgttcaaaaagcaaaacttgttactgaattaacaaactttgta
aagatttgtacttctttgcatatacaaaaagttgatttaattcttcaaaatactacagtg
atctccgagaagaacaaattagaatcagattacatggctgcttcatcacagctccgtctc
acagagcaacatttcattgagctggatgaaagcagacagagattactgcagaaatgcaag
gagctgatgaagagagctaggcaagtatgtaacctgggcgcagagcagacggttcctcaa
gaataccagacacaagtacccaccattccaaatggacacaactcctcaccccccatggct
ttccaggatcttccaaacacgttggatgaaattgatgctttattaactgaagaaagatca
agagcttcttgcttcacaggactgaatcccacagtcgttgaggaatacacaaaaagagaa
gaagaaatagagcaattaactgaggaactaaagataaagaaagttgaactggataaatac
agggaaaacatttcacaggtaaaagaaaggtggcttaatcctttaaaagagctcgtagaa
aaaattaatgaaaaattcagcaatttttttagttccatgcagtgtgctggtgaagttgat
ctgcatacagaaaatgaggaggactatgataagtacggcatccggattcgagtcaagttc
cgcagcagcacgcagctgcatgagttaactccacaccaccagagcgggggtgaaagaagc
gtgtccacgatgttgtacttgatggcccttcaggaactcaatcgatgtccgttcagagta
gttgatgagatcaatcagggaatggacccgatcaatgaacggagagtgtttgaaatggtt
gtaaatactgcttgtaaagaaaatacatctcagtacttctttattacaccaaagctcctg
cagaatcttccttattctgaaaagatgactgtgttgtttgtctacaacggtcctcatatg
ttggaacctaacaggtggaacctaaaggctttccagaggcggcggcggcgcatcacgttc
actcaaccgcagtga
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