Lynx rufus (bobcat): 124528775
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Entry
124528775 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124528775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124528775
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124528775
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124528775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
Baculo_IE-1
Prok-RING_4
RING_XB3-XBAT31
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
124528775
NCBI-ProteinID:
XP_046958548
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MGTEASGSGPALQELVREAEISLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSALRPAPAAHRAAPSAPGAFTCHHVF
GGWGTLVNPTGLALCPKTGRVVVAHDGRRRVKIFDSGGGCAHQFGEKGEGAQDIRYPLDV
TVTNDCHVVVTDAGDRSIKVFDFFGQVKLVIGGQFSLPWGVETTPQNGVVVTDAEAGSLH
LLEVDFPEGVLRRTEKLQVHLSNPRGVAVSWLTGAIAVLEHPPGLGTGACGTTVKVFSPS
MQLVGQVDTFGLSLFFPSRITASAVTFDHQGNVIVADTSSQAVLCLGKPEEFPVLKPMIT
HGLSHPVALTFTKENSLLVLDSATHSIKVYKADWG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgaggcgtcggggagcgggccggcgctgcaggagctcgtgcgcgaggccgag
atcagcctgctcgagtgcaaggtgtgctttgagaggttcggccaccgccagcagcggcgc
ccgcgcaacctgccctgcggccacgtggtgtgcctggcctgcgtggctgcgctggcgcac
ccgcggacgctggccctcgagtgccccttctgccgccgagcctgccggggctgcgacacc
agcgactgcctgccggtgcttcacctcctggagctcctgggctcggcgctccgcccagcc
cccgccgcccaccgcgccgcccccagcgcccccggggccttcacctgccaccacgttttc
ggaggttgggggaccctggtcaaccccacggggctggcgctgtgtcccaagaccgggcgg
gtcgtggtggcgcacgacggcaggaggcgggtcaagatctttgattccgggggaggatgt
gctcatcagtttggagagaagggggagggcgctcaggacattaggtacccacttgatgtc
accgtcaccaacgactgtcatgtggttgtcaccgacgccggcgaccgctccatcaaagtg
tttgatttttttggccaggtcaagcttgtcattggaggccagttctccttaccttggggt
gtggagaccacccctcagaatggggtcgtggtaactgatgcggaggcagggtccctgcac
ctgctggaagtcgactttccagaaggggtcctcaggaggaccgagaaattgcaagttcat
ctgagcaatcccagaggggtggccgtgtcgtggctcaccggggccattgcagtcctagag
caccctcccggcctggggaccggagcctgcggcaccacggtgaaggtgttcagcccaagc
atgcagctcgtgggccaggtggatacctttgggctgagcctctttttcccctcgagaata
actgcctccgcggtgacctttgatcaccaggggaatgtgattgttgcagatacttctagt
caggctgtcctatgcttaggaaaacctgaggagtttccagtcctgaagcccatgatcacc
catggtctttcccatcctgtggcactgaccttcaccaaggagaactctcttcttgtgctg
gacagtgcaacccattctataaaagtctacaaggctgactgggggtaa
DBGET
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