Lynx rufus (bobcat): 124529291
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Entry
124529291 CDS
T08475
Name
(RefSeq) zinc finger protein 40-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124529291
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124529291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_jaz
NOA36
Motif
Other DBs
NCBI-GeneID:
124529291
NCBI-ProteinID:
XP_046959082
LinkDB
All DBs
Position
Unknown
AA seq
2716 aa
AA seq
DB search
MPRTKQIHPRNLRDKIEEAQKELNGAEVSKKEILEAGIKATSESLKGVKRKKIVAENHLK
KIPKSPLRSPLQAKHKQNTDEPAFAVLQSAPESHKKQNPSPVKNGKQFAKHNGETPGVVA
EASKSEDPASPKKPVFLQHPSELRRWGSAGSDPSRSGFPDAKCDSRSLSSKTRTDRSECI
SSTRSPTSSYTNTAFDVLLKAMEPELSTLSQKGSSCAVKVEKLRPNKTVQPPSQLNSSSP
DAPTQTSQESVSESQPSPCPSYTVHVSATQKSEPATVQSVSHPCNQHEHFVSQPHQQNQP
LPARSGFPRSLVNLQNQENAKLEQVYHMAATSSVGLTPPSSRTQVTPQNQQMDSASPMSV
SPAHSTPSAPTPIYNSAPVASVVNHSVEQMCNLLLKDQKPKKQGKYICEYCNRACAKPSV
LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAHTIKLGLVLQPDAGGLFLSQESP
KALSIQSDVEDSGESDEEGAAEERQNDPVSMDPQPVQIMKMMSHSEALPKSSSIPSNPDH
VVGDFPLQDKSSESQAVPELPKVVVHPVGVSPLRVDSPKLPDSKPELSSAQTPKDLQGTN
VLSHSAWTSSLETDEKSRQKGDGSQPEGKQEPHVGTGHAQLQRQQATDCSQEQQGKLLSP
RSLGSTDSGYFSRSESADQTASPPTPFAKTLPTTDQDLNKNNGPSAPRISTPAPSALSTS
EKALLLPGQMRPPLATKTLEERISKLISDNEALVDDKQLDSVKPRRTSLSRRGSIDSPKS
YIFKDSFQFDLKPMGRRTSSSSDIPKSPFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTT
GYSAVPASVIPPPHPLRGSQSFDDKIGAFYDDVFVSGPNTAVPQSAHPRTLVRQSAVEDS
SANENHLLGAGQSLDESYPGCGAASDTGPARGKSLAPGSHLEKKKSHQGRGTMFECETCR
NRYRKLENFENHKKFYCSELHGPKTKVAVREPEHSPVPAGSTQPQILHYRVAGPAGVWEQ
TPQIRKRRKMKSVGDDDELQQNERGASPKSSEGLQFQNSLGPASTLSKHNVAITSEQHRK
IQLQASQIQLAARGPDQTMDPKLSTIMEQHISSAAQDKTEPKRHGTGISVIQHTNSLSRP
NSFDKLESFERGSPVSFQELNRTVKPGSLKVMGISPEEGRPPQNTSHPHQPALSSDALRA
ELQDGPRKSPSERHVLGQPSRLVRQHNIQVPEILVTEEPDRDLEAQGYDQEKSEKFSWPQ
RSETLSKLPTEKLPPKKKRLRLAEMEHSSTESSFDSTLSRSLSRESSLSHTSSFSASLDV
EEVSKTEASPKMDFLNRAEFLMIPAGSNTLNVPGTHREMRRTASEHISCVQTSMEVSDFR
SKSFDCGSITPPQTTPPVESQPLTSPSGMGVTGHVPLLERRRGPLMRQISLNLAPDSRVS
PGNPPSFQTIALASVNTAPFPGPQLTNASLAEFPANALHSQTQVKDQRTETSSSSSTNIF
PVQQLFGINVLSPVHTPHSHPNTQTSLQVSMQSVQPDANPSLCVASKSKGCFAPKYQLHC
QVFTSSQSCASNPVLSLPKQVLSDPVGAADHRGTSLALPTKLIDAMSGSCVPPPLKLGGQ
AQNVPTSFALPVHLQSNVPAYCFATVTPLPQILVTQDLSNQPICQANCSMVPISEEQNSV
PKLQTDHQNALSNPEAEPVCENVFSEMGQTLPPSEPLPVTQKTSVGRLSPQQESSASSKR
MLSPANSLDIAMEKHQKRAKDENGAICTTEIRPFEPGSSRPSEVNKQKKPILVRQVCTTE
PLDGVLSEQDVFSQPEISSEAVSLTDVLPADDLSSEHSKSVVTEPIIELQEFENIKSSTS
LTLTVRNSPVPAEDIHLSPLERVDGNQERKSPGVKTQRDKESIQDQSQATLLVSDAGGAQ
QLPFPSLKTSTNFTWCYLLKQKALHLPQNDQKTSAYTDWTVSASNPNPLGLPTKVALSLL
NSKQKTGKSLYCQAITTHSKSDLLVYSSKWKSNLSKRALGNQKSTVVEFSNKDASEINSE
QDKENSLIKSEPRRIKIFDGGYKSNEEYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRT
HTDVRPYHCTYCNFSFKTKGNLTKHMKSKTHSKKCVDLGVSVGLIDEQDTEESDEKQRFG
FERSGYDLEESDGPDEDDNENEDDDEDSQAESVLSAAPSVTASPQHLPSRGGLQDPGSAE
EDVRIADCFSGAHTDPMDVLPRALPTKMTVLSTVQSDHSRKTESPVKTGPHAAKDGEETA
APVDSSRSPEAAPRSPCHQMSVDYPETEEILGSSVAGKNTTLTQGTACVRRPPPAAERGP
HTAVGAPSGASPQPDAQEQKQQVTLQPPPGLPSPQTHLFSHLPLHSQQQSRTPYNMVPVG
GIHVVPAGLTYSTFVPIQAGPMQLTIPAVNVIHRTVGPPGDSVAEVSGAPSPAGVAELSG
VVPCIPIGQIRMPGLQNLSTQALQPLPSLGVETVNILGLANTNVAPQVHPPGLALSAVGL
QVLTANPSPQSSPTPQAHIPGLQILNIALPTLIPSVGQVPADPPGLPEMPPSQPRAREAP
PRPTSGAGADQGGGASSPQGSPQVQRENATHVLDASAPARDPVRPDGSRKADAGKAAAVN
HVKPRHELAPLQGKPAASAEPLLQVHPEASLEPCGLRTRSPEGQVPGPAPPPRRQATAQF
SDVSSDDDEDRLVIAT
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaccaaacagattcatcctagaaatctaagagataaaattgaagaagcacaa
aaagagcttaatggggcagaagtgtcaaaaaaagaaatcttagaggctggtattaaagca
acttcagaatcacttaaaggtgtgaaacgaaaaaagattgtagctgagaaccacctgaaa
aaaataccaaaatcccccctgaggagtccccttcaggcaaaacataaacaaaatacagac
gagcctgcttttgctgttcttcagagcgcgccggagtctcacaagaagcagaatcctagc
cccgtgaaaaatgggaagcagtttgccaaacacaatggagaaacacctggggtagtcgct
gaggcctccaaatccgaagatcctgcgtccccaaagaagcccgtgtttctgcagcaccca
tctgaactgcgccgatggggatcggcaggctctgaccccagcaggtcgggcttcccggat
gcaaaatgtgactctcgatctttgtcgagtaaaaccaggactgaccgcagtgaatgtatc
tcctccactcgtagtcccacttcctcttacacaaacaccgcatttgatgtcttactgaag
gcaatggagccagagctgagcaccttgtcgcaaaagggctcatcttgtgcagttaaggta
gaaaaactgagaccaaataaaactgtacaacccccttctcagttaaacagcagctcaccg
gacgccccaactcagacttcccaagaatctgtttctgaatcgcagccttctccttgtccc
tcgtacacagtgcacgtgtctgcaactcagaagagtgagccagccacggttcagtcagtg
tctcacccgtgtaaccaacacgaacacttcgtgtctcagcctcaccaacaaaatcagccg
cttccagcgcgttcaggtttcccaaggtccctggtgaatctgcaaaatcaagagaatgcc
aaacttgaacaggtttatcacatggcagcgacgtcatctgtgggtctgactccgccttcc
agtagaactcaggttactcctcaaaaccagcaaatggattctgcttcaccgatgtccgtg
agtccagcccattcgacaccgtcagcccccacgccaatttataactcagctcctgtcgcc
tctgtcgttaaccacagcgtggagcaaatgtgcaatcttcttctgaaagatcagaagcca
aaaaaacaaggaaaatacatttgtgagtattgcaatagagcttgtgcaaagcctagcgtg
cttttgaagcacatccgctcccatactggagagcgaccctatccctgtgtgacctgtgga
ttttcatttaagactaaaagcaatctgtacaagcacaaaaaatcccatgcacatactatc
aaactgggtcttgtcttgcaaccagatgctggtggtttgttcttgtcacaggagtccccc
aaagcacttagcatccaatcggacgtagaagacagtggggagagcgatgaggagggggct
gctgaggaaagacagaacgacccagtctccatggacccgcagcctgtgcagataatgaaa
atgatgtcccattctgaagcgttaccaaaatcaagttccattccaagcaatccagaccat
gtggtaggtgactttccactacaggacaaatcttcagaatcacaggctgtgccagagtta
ccaaaagtcgtggtccaccctgtcggtgtgtcccctttaagagtcgacagcccaaagctc
ccggattccaaacctgaactgtctagtgcacagacaccgaaggaccttcagggaactaat
gtcctgtcccactcagcctggacatcctccctcgagactgacgagaagtcccgtcagaaa
ggggacgggagtcagccagaagggaaacaggaacctcacgtggggacaggacacgcccag
ctgcaaaggcagcaggctactgattgctcccaagagcagcaaggaaaacttctgagtcct
cggagtttaggaagtacggattctgggtacttttcacgttcggaaagtgccgaccagacc
gcgagtccgccgactccctttgccaaaacgttgcccaccacggaccaagacttaaataag
aataatgggccctctgcacctcggatcagtacaccagcaccttctgctctgtcaacaagt
gaaaaagcattgcttctaccgggtcagatgcgcccacccttggcgacaaaaacacttgag
gagcggatatcaaagctgatctcagacaacgaagccttggttgacgataagcagctggat
agcgtaaagccacggagaacctctctctcgaggcgaggaagtatcgactctcccaagtca
tacatatttaaagattctttccagttcgatttgaaaccaatgggacggagaacaagctcc
agctcggatataccaaagtcccctttcacccctaccgagaaatcgaagcaagtcttcctt
ctgtctgtaccttcccttgactgcttgcccattacgagaagtaactccatgcctaccaca
ggttattcagcagtacctgcgagcgtcatcccgccccctcaccccctgagaggaagtcag
tcatttgatgacaaaatcggcgctttctacgatgacgtctttgtgtcaggccctaacact
gccgtgccccagagtgcacatccacggacccttgtcagacagtcagcagtagaagactct
tcagcaaatgaaaaccaccttctcggtgctggacagtccctagacgagagctatccagga
tgcggtgcggccagtgacactgggccggccaggggcaagtccttggccccaggctcacat
ttggagaaaaagaagtcccatcaagggcgagggacaatgtttgagtgtgaaacctgcaga
aacaggtatagaaaactggagaattttgaaaaccacaagaaattttactgttcagagtta
catggaccaaaaacaaaggtggccgtgagggaacctgaacacagccctgtgcctgctggt
agtacacagcctcagattctgcactaccgagttgcgggccctgcaggggtgtgggagcag
acacctcagatcagaaaacggaggaagatgaagagtgttggagatgacgatgaacttcag
caaaatgaaaggggggcgtccccgaaaagctccgaaggcctccagttccagaattctctg
ggccctgcttccactttgtctaagcataacgttgcaataacaagtgaacagcacagaaag
atacagctgcaggcctcccaaatccagctggcggccagaggtcccgaccagaccatggat
cccaagctgtctaccatcatggagcaacacataagttcagctgcccaggacaagacggag
ccgaagaggcacggaactggaatctccgtcattcagcacacaaactcgctgagcagaccc
aattcattcgacaagcttgagtcttttgaaagaggttccccagtctccttccaggagctg
aacaggacagtgaagcccgggtctctgaaagtgatgggaatttccccagaagaagggcgc
cctccccagaacacgtctcaccctcaccagcctgcgctgtcatcagatgctctgagagca
gaacttcaggacggtcccaggaagagtccaagtgaacgacatgtgttgggacagccctcc
cgactcgttcggcagcacaacatccaagtcccagaaattctggtcaccgaagagccagat
cgggacctcgaagcccaaggctatgatcaggaaaagtcagagaagttcagttggcctcag
cgtagcgaaaccttgtcaaagttgccaaccgagaagctgccacccaaaaagaagaggctc
cgtcttgccgagatggagcactcgtccacagaatcgagtttcgactccactctgtccagg
agcctaagtagggagagtagtttatctcacacttcgagtttctcagcttcattggacgtt
gaggaggtttctaaaacggaggcttcccccaaaatggattttctaaacagagcagagttt
ctcatgattccagctggctcgaatacactgaacgttcctggaactcaccgagaaatgagg
cgcaccgcttcagaacacattagctgcgtgcaaacgtcgatggaggtctccgatttcaga
agtaaatcgtttgactgtggaagcataactccaccccagacaacaccacctgttgaatcg
cagcccctgacgtccccttcgggcatgggggtcaccgggcacgtgcctctcttagaaaga
aggaggggcccgctgatgcggcagatatctttaaacctagccccagatagtcgtgtgtct
cccgggaacccaccatctttccaaacaatcgctcttgcgagcgtgaacacagcaccgttt
ccgggccctcagctcacgaatgcatctttagccgagtttcctgcaaacgctctgcactcc
cagactcaagttaaggatcagcgaacagaaacctctagttccagctctactaacatcttc
cccgttcaacagcttttcggtatcaacgtgttaagtccagtgcacaccccccatagccac
ccaaacacacagacgtctctgcaagtgtctatgcagagtgttcagccggatgcaaatccc
agtttatgtgtagcttctaaaagtaaaggttgctttgctcccaagtaccaacttcattgt
caggttttcacttcaagccagtcttgcgcttccaatcctgtgctttctttgccaaagcaa
gttctctcggatccagttggggctgctgaccatcgcgggacttcgttagcattaccaacc
aaattgatagatgccatgtccggttcatgtgttccaccaccactgaagctaggtgggcag
gcgcagaacgtgccgacgtcgtttgcattgcccgtgcatctgcagagtaacgttccagcg
tactgttttgccacagtcactcctctgccacaaatcctggtgacccaagacctgtccaac
cagccaatttgccaggctaattgtagcatggtgccaatcagcgaggaacaaaattccgtg
ccaaaattgcagacggatcaccagaatgctttgtcaaacccagaggcagaacctgtctgt
gaaaatgttttttcagagatgggtcagactctccctccatcagaacctttgcccgtaacc
cagaaaacgtctgttggtaggctttccccccagcaagaatcttcagcttcaagtaaaagg
atgctttccccagcaaacagtttagacattgccatggaaaagcaccagaagcgtgctaaa
gatgagaatggggctatttgtacaacagagatcagaccctttgaaccagggagttcaaga
cctagtgaagttaataaacagaagaaacctattttagtgaggcaggtttgtactacggag
cctcttgatggtgtgctgtcggaacaggatgttttttctcaacctgaaattagtagtgag
gctgttagtttgacagatgtcctaccagctgatgatttgtcatccgaacactctaagtct
gtagttacagaacctataatcgaactacaggagtttgaaaacatcaagtcctccacgtcg
ctcactcttacagtgagaaattcacctgtccctgcagaagacattcacctttctcctttg
gaacgtgtagacggtaaccaagaaaggaagtctccaggggttaaaactcaacgtgacaaa
gagagcatccaagaccaaagtcaagccacacttttagtgtctgatgcgggaggtgcacag
cagctgcctttccccagcctgaagacctcaaccaactttacatggtgttacctattaaag
cagaaggcattgcatttgcctcagaatgaccagaaaacttcagcctatactgattggaca
gttagtgccagtaatccaaacccacttggtttgcctacaaaagttgccctttctctcctt
aattcaaaacagaagactggaaaatcactatattgtcaagcaataactacccattccaaa
tcagatttattggtctattcaagcaagtggaaaagcaacttaagcaagagagcattaggt
aatcaaaagtccacagtagttgaattcagcaataaagatgcctctgaaattaacagtgag
caagataaagaaaattccttaatcaaaagtgaaccaagaagaattaaaatatttgatgga
ggatataaatcaaatgaagagtatgtatatgtccgaggcaggggaagaggaaagtacatt
tgtgaagaatgtggaatacgttgtaagaaacctagtatgttaaagaaacacatacggacc
catacagatgtccgcccctaccactgcacttactgtaacttctcctttaagacgaaagga
aatctgacaaaacacatgaagtccaagacacatagcaagaaatgtgtggatttaggcgtc
tcagtaggtttaatagatgaacaagatacagaagaatcagatgagaagcaaagattcggt
ttcgagcggtctgggtatgaccttgaagagtcggatggcccggatgaggacgataacgaa
aatgaagatgacgatgaagacagtcaggctgaatctgtcttgtcagcggctccctccgtt
acagccagcccgcagcatcttccgtctagaggtggcctccaggatcctgggagcgcagag
gaggacgtcaggatcgccgactgcttttctggggcgcacacggacccgatggacgttcta
cccagagccttgcccaccaagatgaccgtacttagcacggtgcagtcagaccacagccgg
aagacggagtctccggtgaagaccgggccgcacgccgcaaaagacggagaagaaacggct
gctcccgtcgactcttctaggtcacctgaggccgcgcccaggtccccgtgtcaccagatg
tctgtagactaccctgaaacagaagaaattctgggaagttctgtggccggaaagaacact
actttaacccagggcaccgcttgcgtgcgacgaccccctcctgccgctgagcgcggcccg
cacacagcagtgggggctccctcaggggcctcgcctcagcctgacgcccaagagcagaag
cagcaagtgaccctccagccgcctccgggcctgccctctccccagactcatctgttcagc
cacctccctctgcattctcaacagcagtccaggacaccttacaacatggttccagtcggg
ggaatccacgtggtccccgccggcctcacgtactccacgttcgtgcccatccaggcgggg
ccgatgcagctcacgatccccgccgtcaatgtgattcacagaactgtgggcccgcccggg
gattcggtcgcagaagtttccggcgctcccagccccgcgggagtggccgaattgagcggc
gtggtgccgtgtatacccattggccaaatccgcatgccgggccttcagaacctcagcacg
caggccttgcagccgctgccgtcgctgggcgtggagaccgtcaacatcctgggcctggcc
aacaccaacgtggccccgcaggtgcacccgccggggctggcgctcagtgccgtgggcctg
caggttctcaccgcaaacccctccccgcagagcagccccacccctcaggcgcacattcca
ggcctccagatcctgaacattgccttgcccactttaatcccctctgtcggtcaagtgccc
gccgacccgccggggcttcccgagatgcccccttcccaacccagggcgcgggaggcgccc
cccaggccgacttcgggagccggcgcagatcagggcggcggggcctcgtctcctcagggg
tccccccaagtccagcgggaaaatgcaacacacgttctagatgcgtctgcccccgcgaga
gaccccgtccggcccgacggctcaaggaaagcggacgcgggcaaggccgccgccgtgaat
cacgtgaagcccaggcacgagctcgcccccctgcagggcaaaccagccgcctcggccgag
cctctgctgcaggtgcatcccgaagcttccctggagccttgcggcctgcggactcgctcc
cccgaggggcaggtgcccgggcccgccccgccgccccgaaggcaggccaccgcgcagttc
agcgacgtgagtagtgacgacgacgaggacaggctcgtgatcgccacctag
DBGET
integrated database retrieval system
