Leptotrichia rugosa: AB8B22_00375
Help
Entry
AB8B22_00375 CDS
T10901
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lrug Leptotrichia rugosa
Pathway
lrug03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB8B22_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrug03021
]
AB8B22_00375
03400 DNA repair and recombination proteins [BR:
lrug03400
]
AB8B22_00375
Enzymes [BR:
lrug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB8B22_00375
Transcription machinery [BR:
lrug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB8B22_00375
DNA repair and recombination proteins [BR:
lrug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB8B22_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DUF4488
Motif
Other DBs
NCBI-ProteinID:
XDU66898
UniProt:
A0AB39VJ44
LinkDB
All DBs
Position
77561..78541
Genome browser
AA seq
326 aa
AA seq
DB search
MLKIEKIAKNVKLTEEKTDNYTAKYTLEPLYRGYGNTIGNALRRILLSSIPGTAIKGIKI
DGVLNEFSTIEGVKEAVTDIILNIKEIVVEADEPGEKKMSLSVKGPAVITAADIKMEPGL
KIINPDQIIMTVTVDKEINMEFLVDSGEGFVISDEINTDGWPIGYLAVDAIYTPIKRVNY
TVEDTMVGRVTNYDKLILEVATDGSIEIKDALSYAVELLTWHIEPFANIGNSMSKYREEE
VETVVASNESESSVEDMKIEELDFTVRSYNCLKKAGVNTISDLTSMSYNELLKIKNLGKK
SLNEIIDKMKELGYDLSEHVSTNEEN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaaattgaaaaaatagctaaaaatgttaaattaacagaagaaaaaacagataat
tacacagcaaaatatacattagagcctttatacagaggttatggaaatactattggaaat
gcacttagaagaatattattatcttcaataccgggaacagcaataaaaggaattaaaatt
gatggggttttaaatgagttttctacaatagaaggtgtaaaggaagcagttacagacatt
attttaaatataaaagaaatcgttgtagaagctgatgagccaggtgagaaaaaaatgagt
ttatctgtaaagggacctgctgtaataacagccgccgatataaagatggaacctggctta
aaaattataaatccagatcaaattataatgactgttacagttgataaagaaatcaatatg
gaatttcttgtagattctggagaaggatttgtaatttcagatgaaatcaatacagatgga
tggccaattggatatttggcagtagatgcaatctatacgcctattaaaagagtaaattat
actgtggaagacacaatggtcggaagggttacaaattacgataaattaattttagaagtt
gcaactgacggaagtattgaaataaaagatgcgctgtcttatgcagtagaattattaact
tggcacatagaaccatttgcaaatattggaaacagtatgagtaaatatcgtgaagaggaa
gtggaaacagttgtagcgagcaacgaatctgaatctagtgtcgaagatatgaaaattgaa
gaattagactttactgttcgttcttataattgcttgaaaaaagctggagtcaatacaatt
tctgacttgacttcaatgagctataatgaactgttaaaaataaaaaatttaggtaaaaag
tctttgaatgaaattattgataaaatgaaagagcttggttatgacctaagcgaacatgtt
tcgactaacgaagaaaattaa
DBGET
integrated database retrieval system
