Leptotrichia rugosa: AB8B22_01355
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Entry
AB8B22_01355 CDS
T10901
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
lrug Leptotrichia rugosa
Brite
KEGG Orthology (KO) [BR:
lrug00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
AB8B22_01355 (tnpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
GHL5
Sigma54_DBD
Zn_ribbon_RanBP
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
XDU67084
UniProt:
A0AB39VGA6
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All DBs
Position
278532..279635
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AA seq
367 aa
AA seq
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MEKAYKFRFYPTKTQIEKLNCAFGCVRYVYNHFLGLKQELYSKEKKSMSYSECSKALTVL
KEKNKWLKDVDKFSLQNSLKDLDVAYKNFFSGKGYPKFKSKKDNRKSYRTSYTNNNIEFL
GKWIKVPKLGKLKIRDKMKPQGRIINATITQAPSGKYYVSLCCTDVEVKKLESTNKNVGI
DLGIKDFAITSDETLIENPKYLQKSLKKLALCQRELSRKPRGSSNRNKARIKVAKCYEKV
TNQRKDFLQKLSTELIRKYDIICMEDLQVKNMVKNHKLARNIVDVSWSEFSRILEYKAKW
CGRTIVKVDKFFASSQICNCCGYKNEEVKDLSIREWTCSVCGAVHNRDINAAKNILKEGL
RILEISA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcatacaagttcagattttatccaactaaaactcaaatagaaaagttaaat
tgtgcttttggttgtgtaagatacgtctataatcattttttaggcttaaaacaggaatta
tatagcaaagagaaaaaatctatgtcatatagtgagtgtagtaaagcgctaacagtttta
aaagaaaaaaataaatggttaaaagatgtagataaattttctttacaaaattctttaaaa
gatttagatgtagcctataagaacttttttagtggaaagggttatccaaagtttaaatct
aagaaagataatagaaaatcatacagaactagttatactaataataatatagagttttta
ggtaaatggataaaagtacctaagttaggaaaactaaaaataagagataagatgaagcca
caaggaagaataataaatgcaacaataacacaagcacctagtggaaaatattatgtgtct
ctatgttgtacagatgtagaagtaaaaaaactagagagcacaaataagaatgttggaata
gatttaggtataaaggactttgcgattaccagtgatgaaaccttaatagaaaatccaaaa
tatttacagaaatctttgaaaaaattagctttatgtcaaagagaactgtcacgaaaacca
aggggcagttcaaatagaaataaggctagaataaaagtggcaaaatgctatgaaaaagta
acaaatcaaagaaaagactttttgcagaaattatcgacagaactgataagaaaatatgac
attatctgtatggaagacttgcaagtaaaaaatatggtaaaaaatcataaattagcaaga
aatattgtagacgtatcatggagcgaatttagtaggatactggaatataaagcgaagtgg
tgtggaagaacaatagtaaaagtggataagttttttgcaagcagtcaaatatgtaactgt
tgcggatataagaatgaagaagtaaaagacttaagcataagagaatggacttgttcggta
tgtggagctgtacataatagggatataaatgcagcaaaaaacatattaaaagaaggacta
aggatattagaaataagtgcttaa
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