Leptotrichia rugosa: AB8B22_03165
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Entry
AB8B22_03165 CDS
T10901
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
lrug Leptotrichia rugosa
Pathway
lrug02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lrug00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB8B22_03165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrug03021
]
AB8B22_03165
Transcription machinery [BR:
lrug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB8B22_03165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
HTH_25
Motif
Other DBs
NCBI-ProteinID:
XDU67433
UniProt:
A0AB39VI64
LinkDB
All DBs
Position
606337..607293
Genome browser
AA seq
318 aa
AA seq
DB search
MLSNVIEDIRKKGKFSFEKIVESNDLSDDEFFELLKFIYSENVPEVRTSVDGSDFIALED
ENFYILEKNTIKSYLEDVKERNREVFEKIKEKKSFKTDELIDRYLKVAVKESLNYSKFGF
SFLDIVQEATLGLISGLNYYYRIMKNFKSPEFFLKNFSIKYILEFQKKLLKNIKSMELSY
ILYLKLKLDKADGYSLEEISKQMSVNPEYLEDLEKLFDKVKDEKSIESEKIFEKADKITK
TYILENIPKKLGYIDEQILVMFYGLDDKIYSEKEIAKNLNIAYHNVNILKEKALNKLSID
MLQSDFVKNSENLNFLVN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgttaagtaatgtaatagaagatataagaaaaaagggtaaatttagttttgaaaaaatt
gttgaaagtaacgatttatccgatgatgaattttttgagttattaaaatttatttattca
gagaatgttccagaagtacggacatctgttgatggaagtgactttatcgccttggaagat
gaaaatttctatattttagaaaaaaatacaataaaatcttatttggaagatgtaaaagaa
agaaatagagaggtttttgaaaaaattaaagaaaagaaaagttttaaaactgacgagtta
attgacagatatttaaaagttgcagtgaaagagagtcttaattattcaaaatttggattt
tcatttttggatatagttcaagaagcgactttggggctgatttcagggttaaattattat
tatagaataatgaagaattttaaaagtccagaattttttttgaaaaatttttcaataaaa
tatattttggaatttcagaaaaaattgctaaaaaatataaaatcaatggaattgtcatat
attttatacttaaaattaaaattggacaaagctgatggttacagccttgaagaaattagt
aagcagatgagtgtaaatccagaatatttggaagacttggaaaaattgtttgataaagta
aaagatgaaaaatctatcgaaagtgaaaaaatatttgaaaaagctgataaaataacaaaa
acatatattttagaaaatattcccaaaaaattgggatatattgatgaacagattttagtg
atgttttacggattggatgataaaatttattctgaaaaggaaatagccaaaaatctgaac
atagcgtatcacaatgtgaatattttgaaggaaaaagcgcttaataagctatctatagat
atgttgcaaagtgattttgtaaaaaatagtgaaaatttgaattttttagttaattag
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