Leptotrichia rugosa: AB8B22_06030
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Entry
AB8B22_06030 CDS
T10901
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lrug Leptotrichia rugosa
Pathway
lrug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB8B22_06030 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrug03019
]
AB8B22_06030 (pnp)
03016 Transfer RNA biogenesis [BR:
lrug03016
]
AB8B22_06030 (pnp)
Enzymes [BR:
lrug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB8B22_06030 (pnp)
Messenger RNA biogenesis [BR:
lrug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB8B22_06030 (pnp)
Transfer RNA biogenesis [BR:
lrug03016
]
Prokaryotic type
tRNA degradation factors
AB8B22_06030 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
TcaA_3rd_4th
Motif
Other DBs
NCBI-ProteinID:
XDU65985
UniProt:
A0AB39VFA9
LinkDB
All DBs
Position
complement(1232221..1234341)
Genome browser
AA seq
706 aa
AA seq
DB search
MFDEKICEFDLGRQKIKISTGKIARQAGGSVVVSCGGTMLLVTATRSKDVKEGQDFFPLT
VDYIEKFYASGKFPGGFIKRETKPGTDEILISRLIDRPIRPLFPEGFLNAVHIVITVISY
DEINFPENLATIGVSAALGLSDIPFAGTVAGVTVGYIDGEYILNPTAEELLQSEIQLSVA
GTKEAVTMVEAGAKEVSEEVMLEAIIFGHEKIKEICLEQEKFLSQFDVKKYEFDKKEVPS
EIKEFVDSFENEVENAIMTPGKLEKYEAIDNLETELFEKYLEKLENDGNENLKDKDFLKD
LEKAFKGYYRDVEKKLVRNAILYKKYRADGRTTTQIRPLDVEIDTLPVPHGSALFTRGET
QALVVATLGSKEDEQIIDGMEDESRKKFFLHYNFPPYSVGEAGFMRAPGRRELGHGNLAE
RALKYVMPDEETFPYTVRLVSEITESNGSSSQATICGGSLALMAAGVPIKSTVAGIAMGL
IKEGETFTVLTDIQGLEDHLGDMDFKVAGTKNGITAIQMDIKIEGITREIMEIALKQALD
GRMFIIDKMEQVISKPRPEVAKNAPKIEIFKINPDKIAGLIGSGGKNIRAIIDETGVSID
IEDDGKVSIFGNDTEKMARALELVKLQTQSVELNSIYEGKVTKIMKFGAFVEVLPGKEGL
LHISEISDKRIAKTEDALKEGDIVRVKVISIENEDKFNLSIKALNN
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgaaaaaatatgtgaatttgatttaggaagacagaaaataaaaataagtaca
ggaaaaatagctagacaagcgggaggttctgtagttgttagttgtggcggaacgatgctt
ctagtcacagctactcgaagtaaagatgtaaaagaaggacaagattttttcccgcttact
gtggattatatcgaaaaattttacgcttccgggaaatttcctggtggatttataaaaaga
gaaactaagccagggactgatgaaatcttgatttcaagacttattgacagaccgattaga
ccactgtttccagaaggatttttaaatgcagtgcatattgtaattacagttatttcttat
gatgaaattaattttccagaaaatttggcgactattggagtgtcagcggcgcttggatta
tcggatataccatttgcagggacggttgctggagttacagttgggtacattgacggcgaa
tatattttaaatccgacggcggaagaacttttacagagtgaaattcaactttctgttgct
ggaactaaagaagccgttacaatggtagaagcaggagcaaaagaagttagtgaagaagtg
atgttagaagcgataatatttgggcacgaaaagattaaagaaatttgtcttgagcaagaa
aaatttttgtctcaatttgatgtgaaaaagtatgaatttgataaaaaagaagttccatct
gaaataaaagaatttgttgactcatttgaaaatgaagtggaaaatgcgattatgactcct
ggaaaactggaaaaatatgaagcaattgacaatttggaaactgaattatttgaaaaatat
ttagaaaaattggaaaatgatggaaatgaaaatctgaaagataaagactttttaaaagat
ttggaaaaggcttttaaaggatattacagagatgttgagaaaaaattggtaagaaacgct
attttatataaaaaatatagagcggatggaagaactacgacacagatcagaccgcttgat
gtggaaattgatacacttcctgtgccacacggttcagctttgtttacaagaggagaaaca
caggcgcttgtcgttgcaacgcttggaagtaaggaagacgagcaaattatagatggaatg
gaagatgagagcagaaaaaaattcttcttgcattacaatttcccaccgtattcagttgga
gaagcaggatttatgagagcacctggtcggcgtgaattgggacacggaaacttggctgaa
agagcactaaaatatgtaatgccagatgaagaaacattcccttatacagtgagattagtt
tcagaaattacagaatctaacggttcatcttcgcaagcaactatttgcggcggttcactt
gcactgatggcagctggagttccaataaaatcaacagttgcaggaattgcgatgggactt
ataaaagaaggggaaacatttactgtgttaactgatattcaaggtttggaagatcacttg
ggagacatggactttaaagtcgctggaactaaaaatggaattacagcaattcaaatggat
ataaaaatcgaaggaattactagggaaataatggaaattgcgctaaaacaggctttggat
ggaagaatgttcattattgataagatggagcaggtgatttccaaaccaagaccagaagtt
gctaaaaatgctccaaaaatagaaatatttaaaattaatcctgataaaattgcaggactt
atcgggtctggaggaaaaaatataagggcaattattgatgaaactggagtttctattgat
attgaagatgatggaaaagtatcaatttttggaaatgatactgaaaaaatggcaagagct
ttggaacttgtcaaacttcaaactcagtcagttgaattgaattcaatttatgagggaaaa
gttacaaaaattatgaaatttggtgcttttgtagaagttttaccaggaaaagaaggactt
cttcatatttctgaaattagcgataaaagaattgcaaaaactgaagatgcgctaaaagaa
ggtgatattgtaagagtaaaagtaatttcaattgaaaatgaagataaatttaatttgagt
atcaaagcgttaaataattaa
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