Luteibacter rhizovicinus DSM 16549: BJI69_03310
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Entry
BJI69_03310 CDS
T04563
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJI69_03310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_03310
Enzymes [BR:
lrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJI69_03310
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJI69_03310
RecFOR pathway proteins
BJI69_03310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
TIP49
Mg_chelatase
AAA_22
Rad17
nSTAND3
AAA_14
NTPase_1
AAA_18
DUF815
AAA_17
NB-ARC
Bac_DnaA
TsaE
AAA_28
RNA_helicase
AAA_33
Sigma54_activ_2
ABC_tran
AAA_24
NPHP3_N
DUF87
Motif
Other DBs
NCBI-ProteinID:
APG06328
UniProt:
A0A0G9GYW9
LinkDB
All DBs
Position
complement(689959..690999)
Genome browser
AA seq
346 aa
AA seq
DB search
MSEHRIISATAAMDDDALEASIRPKRLAEYLGQETVREQMAIYIEAARRRQGALDHVLIF
GPPGLGKTTLSHVIANELGVNVRSTSGPVLERAGDLAALLTNLEANDVLFVDEIHRLSPV
VEEVLYPAMEDFQIDIMIGEGPAARSIKLDLPPFTLIGATTRAGLLTGPLRDRFGIIQRL
EFYSVDELTAIVRRAAKIFNIECDMDGAIEIARRSRGTPRIANRLLRRVRDFAEVRGDGK
ITHDLARAATDMLRVDALGFDDLDRRLLKTIIENFDGGPVGVESLAAALSEDRGTLEDVV
EPYLIQQGYLIRSARGRMASAKAWRHLGLTPPPRQTVAPDLFSDDA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcaccgcatcatttccgccaccgccgccatggacgacgatgcgctggaagcc
agcatccgtccgaagcgcctcgccgaatatctcggccaggagacggtgcgtgagcagatg
gccatctatatcgaggcggcacggcgccggcagggtgcgctggaccacgtgctgatcttc
gggcctcccggcctgggcaagaccacgctctcgcacgtgatcgccaacgagctgggcgtg
aacgtgcgctcgacctcgggtccggtgctggagcgggcgggggatctcgccgccctgctg
accaacctcgaggcgaacgacgtccttttcgtggacgagattcaccgcctgtcgcccgtg
gtcgaggaagtgctgtacccggccatggaagacttccagatcgacatcatgatcggcgaa
ggccccgcggcccgctcgatcaagctcgaccttccgccgttcaccctgatcggcgccacg
acccgcgcgggcctgcttaccggccccttgcgtgaccggttcggcatcatccagcggctg
gagttctacagcgtggacgagctgaccgcgatcgttcgtcgcgcggcgaagatcttcaat
atcgagtgcgatatggacggggcgatcgagatcgcccgccgctcgcggggcacgccccgt
atcgccaaccggctgctccgacgtgtgcgcgactttgccgaggtccgcggtgacggcaag
atcacccacgacctcgcgcgcgccgccaccgacatgctccgggtcgacgccctgggcttc
gacgacctcgatcgccgcctgctgaagacgatcatcgagaacttcgatggcggtccggtg
ggcgtcgaatcgctggccgccgccctgagcgaagatcgcggcaccctggaggacgtggtc
gagccctatctgatccagcagggctacctcatccgtagcgcccgtggccgcatggcctcc
gccaaggcctggcgccacctgggcctgaccccgccgccgcggcagaccgtggccccggac
ctgttttcggacgacgcatga
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