Luteibacter rhizovicinus DSM 16549: BJI69_04670
Help
Entry
BJI69_04670 CDS
T04563
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrz03032
]
BJI69_04670
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_04670
Enzymes [BR:
lrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BJI69_04670
DNA replication proteins [BR:
lrz03032
]
Prokaryotic type
DNA Topoisomerases
BJI69_04670
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJI69_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
APG03271
UniProt:
A0A1L3EQC9
LinkDB
All DBs
Position
1008449..1009531
Genome browser
AA seq
360 aa
AA seq
DB search
MSRKPPDAALEVPDVERAHAKAAGLVYVCDTDNGITRCKRGRGFHYLDIDGKRVTDEDVL
TRIRALAIPPAYTKVWICPNERGHLQATGRDARLRKQYRYHAKWRSVRDRDKFERILEFG
EALPRLRRRLRKDLALPGLPREKVLALVVSLLEETMIRVGNDAYARENNSFGLTTLRSRH
VAARQGRIEFHFRGKSGQWRDVTLDDRRLVKAIRKVQELPGQRLFQYLDDDGQRQPIDSG
MVNDYLREVTGGEFTAKDFRTWGGTINAVAVLAARTVPDEGGERAVKATLAEAVKEVAAV
LGNTPAVCRASYIHPEVFAGWLDGELHRRVPESGVAFPRKLETSTLAFLRRRLHVSRRSR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaagccgcccgatgccgcccttgaagtgcccgatgtggaacgggcccacgcg
aaagcggcgggcctggtctacgtctgcgacaccgacaacggcatcacgcgctgcaagcgg
ggacgagggtttcactacctcgacatcgacggcaagcgggtgaccgacgaggacgtgctc
acgcgcatccgtgcgctggctatcccgccggcctatacgaaggtgtggatctgtcccaac
gagcgcggccacctccaggcgaccggacgcgatgcccgtctgcgcaagcaataccggtat
cacgccaaatggcgcagcgtgcgcgaccgcgacaagttcgaacggatcctcgagttcggc
gaggcgctgccccggctgcgtcgccggctgcgcaaggatctcgccctgcctggcctgccc
cgggaaaaagtgctggcgctggtggtcagcctgctggaagaaaccatgatccgcgtgggc
aacgatgcctacgccagggagaacaattcgttcggcctgaccacgctgcgctcgcgacac
gtcgcggcgcgccagggccgcatcgaatttcacttccgcgggaagagcggtcagtggcgt
gacgtgacgctcgacgaccgccgtctggtcaaggccatacgcaaggtccaggaactgccc
ggccagcgtctctttcagtacctggacgacgacgggcaacgccagcctatcgactccggc
atggtgaacgattacctgcgcgaggtgaccggcggcgagttcaccgcgaaggacttccgg
acctggggcggcacgatcaatgcggttgccgtgctggccgcccgaacggttcccgacgag
ggtggcgaacgcgctgtgaaagcgaccctggcggaggccgtgaaagaggtggccgccgtg
ctcggcaatactcccgctgtctgtcgtgcgtcctacatccatccggaggtcttcgccggc
tggctcgacggcgaattgcatcgtcgcgtgccggaatcgggcgtcgccttcccccgaaaa
ttggaaacatcgaccctggcttttctccgtcgccggctccatgtatcccgacgctcccgt
tga
DBGET
integrated database retrieval system
