Luteibacter rhizovicinus DSM 16549: BJI69_11735
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Entry
BJI69_11735 CDS
T04563
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJI69_11735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrz03019
]
BJI69_11735
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_11735
Enzymes [BR:
lrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJI69_11735
Messenger RNA biogenesis [BR:
lrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BJI69_11735
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJI69_11735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
APG04500
UniProt:
A0A0G9HDR1
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All DBs
Position
2609282..2611099
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AA seq
605 aa
AA seq
DB search
MQSQAHDLLHSVFGYPEFRGQQQAIVEEVANGGDALVLMPTGGGKSLCFQIPALMRHGTG
IVVSPLIALMQDQVDALTEAGVRARYLNSSLDSATQREVEELLLAGDLDMLYVAPERLLT
GRFLGLLDRIPIALFAIDEAHCVSQWGHDFRPEYRELAILHERFPEVPRIALTATADDRT
REEIVERLGLHAARRFVSSFDRPNIRYRVAPRQNARRQLLDFLDAHRGEAGIVYCLSRRK
VDETAAWLVEAGVEALPYHAGLDGDTRTRHQQRFLREDAVVMVATVAFGMGIDKPDVRFV
AHLDLPRSMEGYYQETGRAGRDGLPAEAWMVYGLGDVVTMSQMISQSEAGDDRKRIERLK
LDSLLGFAEATRCRRQLLLEAFAEVYPQPCGNCDNCLVPPTTWDATLAAQKAMSCIYRSG
QRYGAGHLIEILRGEAGERVRDLRHDQLTVFGVGADMDATQWRSVFRQLLAAGLIEADPE
GYGTLRLSPTSGPVLKSERKVWLREDARPAKGRRTSRPSPATTGGSLGIEEIEQPLWSEL
RRVRSELAKQHGVPAYVIFHDATLLAMLRALPANEDELGSISGVGENKLKRYGKDFLAVL
TASGA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcccaggcccacgacctccttcactccgttttcggttaccccgagttccgcggc
cagcaacaggccattgtcgaggaggtcgccaacggcggcgacgctctcgtcctgatgcct
accggcggcggcaagtcgctgtgtttccagattcccgcgctgatgcgccacggcacgggc
atcgtcgtttcgccactcatcgccctcatgcaggatcaggtcgacgcgctgaccgaggcc
ggcgtacgcgcccgttacctcaactccagcctggactcggccacgcagcgcgaggtcgag
gagctcctgctcgccggtgacctggacatgctctatgtcgcgccggaacgactgctcacc
gggcgtttcctgggcctgctcgaccgtattcccatcgccctgttcgccatcgacgaagcg
cattgcgtctcgcagtggggacacgatttccgtcccgaataccgtgagctggcgatcctt
cacgagcgctttccggaagtgccgcgtattgccctcaccgctacggcggacgatcgtacg
cgcgaagaaatcgttgaaaggctcggcctacatgcggcgcgtcgctttgtctccagtttc
gatcggcccaacatccgctatcgcgtggcgccgcgacagaacgcacggcggcagctgctg
gatttcctcgacgcgcatcggggcgaagccggcatcgtgtattgcctgagccgccgcaag
gtggacgagacggccgcatggctggtcgaggctggcgtcgaagccttgccgtatcacgcc
ggcctcgacggcgacacacgcacgcgtcaccagcaacgcttcctccgcgaggacgcggtg
gtgatggtggccaccgtcgccttcggcatgggtatcgataagccggacgtgcgcttcgtc
gcccacctggatcttccgcgcagcatggaagggtattaccaggagaccggtcgtgccggt
cgcgatggcctgccggcggaggcctggatggtctatggcctgggcgatgtcgtcaccatg
agccagatgatttcgcagtccgaggcaggcgacgatcgcaagcgcatcgagcgtctcaag
ctcgactccctgctcggctttgccgaggcgacgcgctgccgtcgccagttgttgctcgag
gccttcgccgaggtctatccgcagccttgcggcaattgcgacaactgcctggtgccgccg
acgacatgggacgccacgcttgccgcgcagaaggccatgtcctgcatttatcgcagcggc
cagcggtacggtgcggggcatctcatcgagattctgcgtggcgaagcgggcgagcgcgtc
cgcgatcttcgccacgaccagctcaccgtgttcggcgtcggcgccgacatggatgccacg
cagtggcggtcggtgttccgccagttgctcgcggccggcctgatcgaagccgatcccgaa
ggttatggcaccctgcggctgtcaccgaccagcggccccgtgctgaagagcgaacgcaag
gtctggctgcgcgaggacgcacgtccggccaagggccgccgcacctcgcggccgtcgccg
gcaaccaccggcggctcgctgggcatcgaggagatcgagcagccgctatggagcgaactg
cgccgcgtgcgctcggaactggccaagcagcacggcgtgcccgcgtatgtcatcttccac
gatgccaccttgctggcgatgcttcgtgcgctgccggcgaacgaagacgaactgggttcg
atcagtggcgtgggtgagaacaagctcaagcgctacggcaaggattttctcgcggtgctg
accgctagcggggcttga
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