Luteibacter rhizovicinus DSM 16549: BJI69_12625
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Entry
BJI69_12625 CDS
T04563
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03030
DNA replication
lrz03430
Mismatch repair
lrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJI69_12625
03430 Mismatch repair
BJI69_12625
03440 Homologous recombination
BJI69_12625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrz03032
]
BJI69_12625
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_12625
Enzymes [BR:
lrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJI69_12625
DNA replication proteins [BR:
lrz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJI69_12625
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJI69_12625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
APG04660
UniProt:
A0A0G9HFB0
LinkDB
All DBs
Position
complement(2800568..2804113)
Genome browser
AA seq
1181 aa
AA seq
DB search
MSVRFAHLHLHSEYSLVDSTIRIKQLVAACVRTGMPAVALTDENNLFGLVKFYKQCTAAG
IKPIAGCDVWVSSPDDPRPWRLTLMCQDRDGYLNLSRLVSRAWREGQGTGRALVDATWMH
PESVRGLIAVVGRESELARVALGAGLPAAGLRLESLRRLFPDRLYLELTRTGRQHEEDWV
RAAMALAGDYELPVIASNDVRFLEREGFESHEARTCINQGRVLADPKRPHDYSEEQYFKS
AEEMEALFADIPEALENTVELAKRCNLELTFGEYFLPNFPVPEGHTLDTFIRAQAQAGLE
ERLAVHPLAAGKTREDYQARLDREVDVIIGMGFPGYFLIVADFIGWGKDNGIPVGPGRGS
GAGSLVAWVLKITDLDPLQFELLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGR
DHVSQIITYGSMAAKAVLRDSGRVLGMGYGQVDRLAKLIPNRPLDLTLGDALGRTEKSKK
EPDRIVKEFCDVYEQEEEPRQLIDLALSLEGLTRNAGKHAGGVVIAPTPLTDFAPLYCEA
SGEGVVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINKRRAKEGTEALVIEALPLD
DPKVYDLLKKAQTVAVFQLESRGMQGMLKDAQADRFEDIIALVALYRPGPMDLIPSFCAR
KHGREAVEYPDPRVEPILKETYGIMVYQEQVMQMAQIVGGYTLGGADLLRRAMGKKKAEE
MVKHRATFREGAAKDGIDSIKADAIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKAHYP
AEFMAATISSDMDNTEKAVTFLEETRTIGIKVLPPDVNASDWMFEAVEPKVVRYGLGAIK
GVGQGICEEIVAERKAKGPYRGLVDFCQRVGSNKLNKRTMEALVQSGALDGLGENRATLV
MHLPEAMRAADQEAKNRASGQVDIFGNAFGAAETPSIIELSGAVPEWPLEQLLQGEHDTL
GHYLSGHPTDPWKGELAQLSSCPIGEIPQRYQPPKPRRNDDDENASRFRRGPETPWTVAG
MVVGMRKRGDSDAFVQIEDATGLLETSFFREVFTEAAPLLTRGTLIVVEGGLRIDDFAGG
YQLRARKAYALSDAMEHFGRLLTLRLNGIGPDFPQHLRQALMAYRGGRTPLMLSGYRNDT
GQASFELGEAWRVRALPDLMRTLRALPGVLGTELRLVRPAD
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcgctttgcccatcttcacctgcacagcgagtactcgctggtcgattcgacc
atccgcatcaagcagctggtcgctgcctgcgtgcgtaccggcatgcctgccgtcgcactg
accgatgagaacaacctcttcggcctggtcaagttctacaagcagtgcacggcagcgggc
atcaagcccatcgccggctgcgacgtctgggtatcgagtccggacgatccgcgcccctgg
cgcctgaccctgatgtgccaggaccgcgacggttacctcaacctgtcgcgcctggtctcc
cgtgcgtggcgtgaaggccagggcaccggtcgcgcgctcgtcgacgctacctggatgcac
cccgagagcgtgcgcggcctgattgccgtggttgggcgggaaagcgagctcgcacgtgtc
gccctcggcgccggcctgcccgccgccggcctccgtctggaatcgctgcgccgcctgttc
cccgatcgcctctacctcgagctgacccgtaccggtcgccagcacgaggaagactgggtg
cgtgccgccatggccctcgccggcgattacgagctgccggtcatcgccagcaacgacgtg
cgctttctcgagcgcgagggtttcgaatcccacgaagcccgcacctgtatcaaccagggt
cgcgtgctcgccgatccgaagcgtccgcacgattacagcgaggagcaatacttcaagagt
gccgaggagatggaagcgctcttcgccgacattcccgaagccctcgagaacacggtcgaa
ctggccaagcgctgcaacctcgaactgaccttcggcgaatacttcctgccgaacttcccg
gtgcccgaaggccacacgctcgacaccttcattcgtgcccaggcccaggccggcctcgaa
gaacgcctcgccgtgcatccgctcgccgcgggaaagacgcgcgaggactaccaggcgcgc
ctggaccgcgaagtcgacgtcatcatcggcatgggctttcccggctacttcctgatcgtg
gccgacttcatcggctggggtaaggacaacggtattccggtcggtccgggccgcggttcc
ggtgcgggttcactcgtcgcctgggtgctcaagatcaccgatctggatccgctccagttc
gagttgctgtttgagcgcttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatc
gacttctgcatggatcgccgcgacgaggtgatcgactatgtcgcgcgcaaatacggccgc
gaccacgtcagccagatcatcacctacggctcgatggcggcgaaggccgtgcttcgcgac
tccggtcgcgtgctcggcatgggctacggccaggtggatcgccttgccaagctcattccg
aaccgccctctcgacctcacactgggcgacgcgctcggccgcaccgagaagtcgaagaaa
gagccggaccgcatcgtcaaggaattctgcgatgtctatgagcaggaggaagaaccgcgc
cagctgatcgacctcgcgctcagcctcgaaggcctcacgcgaaatgccggcaagcacgca
ggcggcgtcgtcatcgctcccacgccgctgaccgacttcgcgccgctctactgcgaagcg
agcggcgaaggcgtcgtcacgcaatacgacaaggacgatgtcgaagcggtcggcctggtg
aagttcgacttcctcggcctgcgcacgctgacgatcatcgactgggccgtcaaggcgatc
aacaagcgtcgcgcgaaggaaggcaccgaagcactggtgatcgaagccttgccgctggat
gatcccaaggtctacgacctgctgaagaaggcgcagaccgtcgccgtcttccagctcgag
tcgcgcggcatgcagggcatgctcaaggatgcccaggccgatcgcttcgaagacatcatc
gccctggtggccctgtaccgccccggcccgatggacctgatccccagcttctgcgcgcgt
aagcatggccgcgaagcggtggagtatccggatccgcgcgtcgagcccatcctgaaagag
acctacggcatcatggtctatcaggagcaggtgatgcagatggcgcagatcgtcggcggt
tacacgctcggcggcgccgatctgttgcgccgtgcgatgggtaagaaaaaagccgaggag
atggtcaagcatcgcgccaccttccgcgaaggcgcggcgaaggatggcatcgattcgatc
aaggccgatgcgatcttcgacctcatggagaagttcgccggctacggcttcaacaagtcg
catgccgcggcttatgcgctggtgtcctaccagaccgcctggctgaaggcgcactacccc
gccgagttcatggccgcgacgatctcgtcggacatggacaacaccgagaaggcggtcacc
ttcctcgaagaaacccgcaccatcggcatcaaggtgctaccgccggacgtcaacgcctcg
gactggatgttcgaagcggtggagccgaaggtcgtgcgctacggcctcggcgcgatcaag
ggcgtgggccagggcatctgcgaggagatcgtcgccgagcgcaaggcgaagggcccgtac
cggggtctcgtcgacttctgccagcgcgtcggctcgaacaagctcaacaagcgcacgatg
gaggcgctggtacagtccggcgcgctcgacggactcggcgagaaccgcgccaccctcgtc
atgcacctgcccgaagcgatgcgcgccgccgaccaggaagcgaagaaccgcgcttccggc
caggtcgatatcttcggcaacgcctttggcgcggcggaaacgccgagcatcatcgaactc
tccggcgccgtgccggaatggccgctcgaacagctgttgcagggtgagcacgatacgctc
ggccattacctgtccggccatccgaccgacccatggaagggcgagctcgcccagttgtcg
agctgcccgatcggcgagatccctcagcgctaccagccgcccaaaccacgtcgcaacgac
gacgatgaaaacgccagccgtttccgtcgtggcccggaaacgccgtggacggtagccggc
atggtggtgggcatgcgcaagcgcggtgacagcgatgccttcgtacagatcgaagacgcc
accggcctgctggaaacgagctttttccgcgaagtattcaccgaggcggcacccctgctt
acgcggggcaccctcatcgtcgtcgagggtggcctgcgtatcgacgacttcgccggcggg
tatcaattgcgtgcgcgcaaggcctatgccttgtccgatgccatggaacacttcggccgc
ctgctgacgctgcgactcaacggcatcggtccggattttccacagcacctgcgtcaggcc
ctcatggcgtatcgcggcggccgcacgccgctgatgctctcgggctaccgcaacgacacc
ggccaggccagcttcgaactgggcgaggcctggcgggtacgtgccctgcccgacctgatg
cgcacactgcgcgccttgccgggagtattgggcaccgagttgcgactggtgcggccggcc
gactaa
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