Luteibacter rhizovicinus DSM 16549: BJI69_13260
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Entry
BJI69_13260 CDS
T04563
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJI69_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_13260
Enzymes [BR:
lrz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BJI69_13260
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJI69_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF7526
Motif
Other DBs
NCBI-ProteinID:
APG04766
UniProt:
A0A1L3EUM5
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All DBs
Position
2927688..2931113
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AA seq
1141 aa
AA seq
DB search
MSDRNDIAPGLMVLHGNRLEELRDVLVAWLRRAPLEPLEDEWVLVQSNGIAQWFRLALAR
AVDDGGLGIAAAVKVELPGRFLWVAYRAVLGRDAVPPESPFDKSRLVWRLMRLLPSVARE
PVFEPLAAFLGADGDARKCHQLAERLADLYDQYQVYRADWLDDWADGRDVLRDARGGAPA
MAAADRWQAALWRRLLEDVGVVEADGHRAAVHARFLRAVAGLTGRPKALPRRIVVFGMSS
LPRQTLEALSALARWSQVVLVVMNPCRHYWADIVDDRELLRAERRRQAAKPGMPLALSDD
DMHLHANPLLAAWGKQGRDYIRLLDEFDHPESYRERFDAWDQRIDLFAEPTSTDLLGQVQ
AAILDLEPLPATPQPIEPGDTSIVFHVAHGPQREVEILHDQLLARFEASAQAGDPILPRD
VIVMVPDIETYGPHIDAVFGRVPRDDPRFIPYSVADRAARGTVPVVMALDVLLGMTESRF
GAGEMADLLDVPAVRARFGLAEDDLPLLHRWIEGAGIRWGLDAAQRASLDLPALEQNTWA
FGLRRMLLGYAVGAGDAWSEIEPYPEVGGLDASLVGPLADLLERLGDHWLALREPASATE
WGVRLRRLLRDFFQGAEPDDDMRIERLLDGLDAWERACVEAAFDEALPIEVVREAWLGQF
DQGGLSKRFLAGAVSFGTLMPMRAIPFRLVCLLGMNDGDYPRARPPMDFDLMSRQGAWRP
GDRSRREDDRYLFLEALLSARDALHIGWVGRSARDNAERAPSVLVGQLRDYLAAAWQGQG
GADLLHGLTVEHPLQPFSRAYFRGEDARLFTYAREWRQAHDGVERAEEAGLVAVTVDRPI
GLGVLRRFLRHPVREFFQARLGVRFDAVDPGGDDREPFAVDSLGRFAMADSLLRAALRSE
GSATAAIGDAAAKLQRSGALPMGGFAAPVRTDIEAVAAAVYGRFVVERRAWPHEAGKREI
RLDVEGVALEDWLADLRGDDQGRLAAFLLSPSNVLDADGAPRAHRLVMPWVDHLVAQAAG
LSVVTRYIGPDATIVLDPLAADEAMAMLVTLLRAWRDGMAAPQPIAVKTALAWLNARSVD
EAPQTARATYEATHDRAHGEIDGDPYLLRAFPDFASLMHAGFVDCLTPYRDFLGALRVEV
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaggaacgacatcgcgccaggtctcatggtgctgcacggcaaccggctcgaa
gagctgcgcgatgtccttgtcgcctggttgcggcgggcgccgctggaaccgctcgaggac
gaatgggtcctggtgcagtccaacggcatcgcgcagtggtttcggctggcgctggcgcgc
gcggtcgacgacggcggcctgggtatcgccgcagcggtcaaggtcgagttgcccggtcgc
ttcctgtgggtggcctatcgcgccgtgctcggacgcgacgcggtacctcccgaatcgcct
ttcgacaaatcccgtctggtctggcgcctgatgcgtctcttgccgtcggtagcccgtgaa
cctgtcttcgaaccgctcgctgccttcctcggtgcggacggtgatgcacggaaatgtcac
cagctcgccgagcgtctggccgacctctacgaccagtaccaggtctatcgcgcggactgg
ctcgacgactgggccgacgggcgtgacgtgctgcgcgacgcccgtggcggtgcgcccgcc
atggctgccgcggatcgttggcaggcggcattgtggcggcgcctgctggaggatgtcggc
gtagtcgaggccgacgggcaccgcgccgccgtccacgcgcgctttctgcgtgcggtggcc
gggctgaccgggcgccccaaggcgctgccgcgccgtatcgtggttttcggcatgtcgtcg
ctgcctcggcagacgctggaggccttgtccgcgctggcgcgctggtcgcaggtcgtgctg
gtggtgatgaatccctgccggcactactgggcggacatcgtcgacgaccgggagctgctt
cgcgccgagcgccgtcgtcaggcagcgaagccgggcatgccgctggcgttgtccgatgac
gacatgcatctgcacgccaatccgctgctggccgcgtggggcaagcaggggcgtgactac
atccgcctgctcgacgagttcgatcaccccgaaagttaccgcgagcgtttcgatgcctgg
gaccagcgcatcgacctcttcgccgagccgacctccacggatctcctcgggcaggtccag
gccgccattctcgacctcgagccactgcccgcgacgccgcaaccgatcgagcctggcgac
acctccatcgtctttcacgtggcgcatgggccgcagcgcgaagtcgagatcctgcacgac
cagttgctggcgcgattcgaggcctccgcgcaggcgggcgatcccatcctgccgcgcgat
gtcatcgtcatggtgccggacatcgagacctacggtccgcatatcgacgccgtgttcggt
cgcgtaccgcgtgacgatccgcgcttcattccttacagcgtggccgaccgtgcggcccgt
ggcacggtgcccgtggtgatggcactcgatgtcttgctcggcatgaccgaatcgcgtttc
ggcgctggcgagatggccgatcttctggacgtccctgctgtgcgcgcacgtttcgggctc
gcggaagacgatctgcccctgctgcaccgctggatcgagggtgcgggtattcgttggggg
ctcgatgccgcacaacgcgcctcgctcgacctgccggccctcgagcagaacacctgggcc
ttcggtctgcgccgcatgctgctcggctatgccgtgggtgcgggcgacgcctggagcgag
atcgaaccctaccccgaggtgggtggcctggatgcgagcctggtcgggccactggccgac
ctgctcgagcgccttggcgaccattggctcgccctgcgcgagcccgcctccgcgacggag
tggggtgtacggttgcgccgcctcctgcgtgatttctttcagggcgcggaacctgatgac
gacatgcgcatcgaacgccttctcgacggactcgacgcctgggagcgtgcctgcgtggaa
gccgccttcgacgaggccttgccgatcgaggtcgtgcgcgaagcgtggctcggtcagttc
gaccagggcggtctttccaagcgattcctcgccggcgcagtgagcttcggcacgctgatg
ccgatgcgcgccattccgttccgcctggtctgccttctgggcatgaacgatggcgactat
ccgcgcgcgcggccgccgatggacttcgacctgatgtcccggcagggcgcgtggcggccg
ggcgatcgctcgcgtcgcgaagacgatcgctacctgttcctcgaagccttgctttcggcg
cgcgacgctcttcacatcggctgggtggggcgcagcgcgcgcgacaacgccgaacgcgcg
ccgtcggtgttggtcggtcagttgcgcgactatcttgcggcggcgtggcaagggcagggt
ggcgccgacctgttgcatggcctgacggtcgagcatccgctccagcccttcagtcgtgcg
tactttcgcggtgaggatgcacggttgttcacctacgcgcgtgagtggcgtcaggcccat
gatggcgtcgagcgggccgaagaagccggcttggtcgctgtcacggtcgaccgtccgatc
gggctcggtgtcctgcgtcgcttcctccgccatccggtgcgcgagttcttccaggcacgc
ctgggcgtgcgtttcgacgccgtcgatcccggcggcgacgaccgtgaaccgttcgccgtc
gacagcctgggccggttcgcgatggcggattcgctactgcgtgccgccttgcgtagcgaa
ggcagtgcgaccgcggcgatcggcgacgccgccgcgaagctgcagcgtagcggtgccctg
ccgatgggcggtttcgcggcgccggtgcgcacggatatcgaggctgtcgccgcggcggtt
tacggtcgcttcgtcgtggagcggcgcgcctggccgcacgaggcgggcaagcgtgagatc
cgtctcgacgtcgaaggtgtcgccctcgaggactggctcgccgatcttcgcggcgacgac
caggggcggctggcggcgttccttctgtcgccctccaacgtgctggatgccgacggtgcg
ccgcgcgcgcatcgcctcgtcatgccctgggtcgaccatctcgtcgcacaggcggccggt
ctgtccgtggtcacgcgctacattggaccggatgccacgatcgttctcgatccgctggcg
gcggatgaggctatggcgatgctggtcaccttgctgcgcgcctggcgcgacggtatggcg
gcgccgcagcccatcgcggtgaaaacggcgctcgcctggctcaatgcccgctcggtcgac
gaggcgccgcaaaccgcgcgtgccacctacgaagccacgcacgatcgtgcgcacggggaa
atcgatggcgacccttatctgcttcgcgccttccccgatttcgcctccctgatgcacgcc
ggtttcgtcgattgcctcacgccgtatcgcgatttcctcggcgccttacgcgtggaggtg
tcgtga
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