Luteibacter rhizovicinus DSM 16549: BJI69_13270
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Entry
BJI69_13270 CDS
T04563
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJI69_13270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_13270
Enzymes [BR:
lrz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BJI69_13270
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJI69_13270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Helicase_RecD
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
Mg_chelatase
AAA_28
nSTAND3
T2SSE
DEAD
Motif
Other DBs
NCBI-ProteinID:
APG04768
UniProt:
A0A1L3EUM9
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All DBs
Position
2934754..2936631
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AA seq
625 aa
AA seq
DB search
MNAQVMTWLDRGVQEARLRPVDRAFARFLASLDDAGDGRVLMAAALASRELGEGHICVDI
EALALAEPLLSDAQAWLPDSILVGSAESDPNTPLVLDAGLLYLRRFWRDEARVADAILSR
LVASGAPADLAQELDRLFPAEAGAINWQKVACAVAARGSFAVITGGPGTGKTTTVVRLLG
LLQTLAHKRDEPRLRIRLAAPTGKAAARLNASIAGQIERLDVDAAVKQAIPAEVTTLHRL
LGSRPDTRAFRHDRDNPLHLDVLVIDEASMIDLEMMAATLDALPRDARLILLGDKDQLSS
VEAGAVLGDLCARADAGHYAPSTRDWLAAVCGVDVAAWTDGADAHALDQRVVMLRRSRRF
GEDSGIGALAQAINAGDAGAVTRAFAGTRGDIAFVAPSAAAIAALAIDGREGAPGHRDYL
DWIERERPAIDASFEAFQRWGAGALAAYARFQLLCATRHGEAGVDKQNERIAQGLLDRGL
IDAVTGWYEGRPVMVTRNDYALGLMNGDVGVTLWVPDGQGSMALRVAFVVMDEQGGERTR
FVVPSRLSAVDTVYAMTVHKSQGSEFEHTALALPSEPSPVLTRELVYTGVTRARTHFTLL
AAPDMLGYAVSRKTRRASGLLRRLL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcaggtgatgacatggctcgaccgtggcgtccaggaagccagattgcgtccg
gtcgatcgcgcgttcgcccgttttcttgccagtctggatgacgccggtgatgggcgcgtg
ctgatggcagcggcactcgccagccgcgagctgggcgaaggccatatctgcgtggatatc
gaggcgcttgccctggccgagccgctgctgtcggatgcgcaggcctggttaccggactcg
atcctggtcggttcggcggaaagtgatccgaatacgccgctcgtgctggatgcgggcttg
ctctacctgcgtcgcttctggcgtgacgaggcgcgcgtcgccgacgcgatcctgtcccga
ctcgtcgcctcgggcgcgcctgccgatctggcgcaggaactcgatcgtctgtttcctgcc
gaagccggcgcgatcaactggcagaaggtggcatgcgcggtggccgcacgcgggtcgttc
gccgtcatcaccggcggccccggcaccggcaagacgacgacggtcgtacgcttgctcggg
ttgttgcagacgctggcgcacaagcgcgatgagcctcggctgcgcatccggctcgcggcg
ccgaccggtaaggccgcggcacgcctcaacgcctcgatcgccggccagatcgagcggctg
gacgtggatgccgcggtgaagcaggcgattcccgccgaggtcaccaccctgcatcgtctg
ctggggagccgcccggatacgcgcgctttccggcacgaccgcgacaatccgctccacctc
gatgtgctggtgatcgatgaggcgtcgatgatcgatctcgaaatgatggccgccacgctc
gatgccctgccgcgtgatgcgcggctgatcctgcttggcgacaaggatcagctttcgtcc
gtcgaggccggtgcggtccttggcgacctctgcgcacgcgcggatgccggtcattacgct
ccttccacgcgtgactggctggcggcggtctgtggtgtcgacgtcgcggcatggaccgac
ggagccgacgcccacgcgctcgaccagcgcgtcgtcatgctgcgtcgtagtcgccgattc
ggcgaagacagtggcatcggcgcactggcgcaggcgatcaacgccggcgacgccggcgcg
gtgacccgggcctttgccggtacgcgaggcgatatcgcgttcgtcgccccctcggctgcc
gcgatcgccgcgctggctatcgacgggcgtgagggcgcgcccggtcaccgcgactacctc
gactggatcgagcgggagcgacccgcgatcgatgcgtctttcgaggcgtttcaacgctgg
ggggcgggcgcgctcgccgcgtacgcgcgattccagctgctctgcgccacgcgccatggg
gaagccggggtcgacaagcagaacgagcgcatcgcccagggtctgctcgatcgcgggctg
atcgatgcggtgacgggatggtacgaagggcgtccggtgatggtgacgcgcaacgactac
gcgctcggcctgatgaacggcgacgtgggcgtgacgctttgggtgccggacgggcagggc
agcatggccttgcgtgtcgccttcgtggtcatggacgagcagggtggcgagcggacgcgc
ttcgtcgtacccagtcgcctgtcggcggtggataccgtctatgcgatgacggtgcacaag
tcgcagggttcggagttcgagcacacggcgctggccttgccatccgagccgtcgccggtg
ctgacgcgggagctggtttataccggagtgacccgggcgcggacgcattttaccttgctc
gcggcaccggacatgctgggctatgcggtgtcgcggaaaacgcggcgggcgtcgggcttg
cttcgtcggttgctttga
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