Luteibacter rhizovicinus DSM 16549: BJI69_14585
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Entry
BJI69_14585 CDS
T04563
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03410
Base excision repair
lrz03430
Mismatch repair
lrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJI69_14585
03430 Mismatch repair
BJI69_14585
03440 Homologous recombination
BJI69_14585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrz03400
]
BJI69_14585
DNA repair and recombination proteins [BR:
lrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BJI69_14585
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJI69_14585
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BJI69_14585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Nuc_deoxyrib_tr
Motif
Other DBs
NCBI-ProteinID:
APG04999
UniProt:
A0A0G9H3P0
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All DBs
Position
3193690..3195402
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AA seq
570 aa
AA seq
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MTARAWRQRQVAIAPSGWPPHIHPVIQRLYAARGVPTPDGAEHRLARMLSPNLLGGMDAA
VALLMEAIASDKHIVIAGDYDCDGATGTAVAERGLRMLGARHVRHVVPNRFVHGYGLSEA
LVASLDPTPDLIVTVDNGVASVAGVAAARARDIAVLITDHHLPGDTLPDANAMVNPNLAG
DGFPSKALAGVGVMFYLLLALRAAMRDAGHFAAGEPDLSALLDLVALGTVADLVVLDFNN
RVLVEAGLKRMRAGKACAGITALIEASGRSLATVGATDLAFAIGPRLNAAGRLEDMSLGV
ACLLTDDHGIARRYAEQLSAINQERREMQAGMVDEAETMVARAAHVDSVGVALFDEGWHP
GIVGLIASKLKEKLHRPVMAFAPAGDDSDELRGSARSIPGFHIRDALAEIDAKHPGLILR
FGGHAMAAGLSLHASDFDRFAAAFDATARGHLDDERLQALVHTDGELDYRDHTLDLAKQI
RYAGPWGQGFPPPIFEARFECASWKPMGSRHLRLQLRHTQGGAPLDAVMFNCYDGTPPPD
RMRVAYELSVNDWQGRESLRLLLTHMEPVA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcgagcctggcgccagcgacaggtcgctatcgcaccgagcggctggccgccg
catatccacccggtcattcaacggctctacgccgcgcgtggcgtgcccacgccggatggt
gcggagcaccgccttgcgcgcatgctgtcgccgaacctgcttggcgggatggatgcggcg
gttgcactgctgatggaagccattgccagcgacaagcacatcgtcatcgccggcgactac
gactgtgacggggccacgggtactgcggtggccgagcgcggcctgcgcatgctcggcgcg
cgtcacgtacgccatgtggtgccgaatcgtttcgtgcacggctacggtctgagcgaggcg
ctcgtcgcatccctggatccgacgcccgatctgatcgttaccgtcgacaacggggtggcc
agcgtggcgggcgtggcggcggcacgcgcgcgcgacatcgccgtcttgatcaccgaccat
catctgccgggtgacaccttgcccgatgcgaacgccatggtgaatccgaacctcgccggt
gacggattcccgagtaaggcgctcgccggtgtcggcgtcatgttctacctcctcctggcg
ctgcgcgcggcgatgcgcgacgccggtcactttgcagccggcgagcccgacctcagtgcg
ttactcgaccttgtggcgcttggcaccgtcgcggacctggtcgtactggacttcaacaac
cgcgtgctggtcgaagcggggctcaagcgtatgcgtgcgggcaaggcctgcgcgggcatc
acggccctgatcgaagccagcggccgctcactggcgaccgtcggcgccacggatctggct
ttcgccatcggccctcggctcaatgcagcgggacgtctcgaagacatgtcactaggcgtc
gcctgcctgctcaccgatgaccatggcatcgcgcgtcgatacgccgaacagctctcggcg
atcaaccaggaacgtcgcgagatgcaggcgggcatggtcgacgaggctgaaacgatggtg
gcgcgtgccgcgcacgtcgattcggtgggtgtcgcgctattcgacgaaggctggcatccg
ggcatcgttggcttgatcgcgtccaagttgaaggaaaagctgcatcgtcccgtgatggcg
ttcgcgccggccggcgacgacagcgacgaactgcgcggctcggcccgctccattcccggt
ttccatatccgtgatgcgctagcagagatcgacgcgaagcatcccggcctgatcctgcga
ttcggcggtcacgccatggccgcgggtctcagccttcatgccagcgacttcgatcgcttc
gcggccgctttcgacgcaacagcgcgcggccatctcgacgacgaacgcctccaggccctc
gtgcacacggacggcgaactcgactatcgcgatcacacgctcgacctcgcaaagcagatt
cgctacgccgggccttgggggcagggcttcccgccgccgatcttcgaagcgcggttcgag
tgcgcttcatggaaaccgatgggtagccgccaccttcgtttgcaactgcgccatacgcag
ggcggggcgcctctcgatgccgtgatgttcaactgctacgacggcacaccgccgcccgat
cgcatgcgcgtggcgtatgagttgtcggtcaacgactggcagggcagggagagcctgcgg
ctgctgctgacgcatatggaaccggtggcctga
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