Luteibacter rhizovicinus DSM 16549: BJI69_21225
Help
Entry
BJI69_21225 CDS
T04563
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Pathway
lrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJI69_21225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrz03019
]
BJI69_21225
03016 Transfer RNA biogenesis [BR:
lrz03016
]
BJI69_21225
Enzymes [BR:
lrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BJI69_21225
Messenger RNA biogenesis [BR:
lrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJI69_21225
Transfer RNA biogenesis [BR:
lrz03016
]
Prokaryotic type
tRNA degradation factors
BJI69_21225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
DUF8097
KH_KhpA-B
KH_PNO1_2nd
NIR_SIR_ferr
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
APG06177
UniProt:
A0A1L3EYS9
LinkDB
All DBs
Position
complement(4671683..4673788)
Genome browser
AA seq
701 aa
AA seq
DB search
MAKVTKSFQYGSHEVTLETGEIARQASGAVMVSMGGTVVLVTVVAAPKARDGQDFFPLTV
DYMEKFYSAGRIPGGFFKREGRPTEKETLTSRLIDRPLRPLFPEEFRNEIQVIAQVVSLN
PEVDGDIPALIGASAAMRLAGVPFKGPIGAARVGYAGGQYILNPTAAQLKTSDLDLVVAG
TSSAVMMVESEAKLLSEDVMLGAVVFGHQQMQLAIDTINAFVAEAGVKTFKWEAPVAKTA
LYDAVKSAVGNRFTEAFQIRDKLARRDVVSALKSDVKTAIAADAEANGWTDADIGNAFGE
VEYRTLRDGVLSTKVRIDGRQLDDVRPISVRVGVLPRTHGSALFTRGETQALVVATLGTT
RDSQLIDAPEGEWKDTFLFHYNFPPFSVGETGRVGSPKRREIGHGRLAKRGVQAVKPTIE
EFPYVIRVVSEITESNGSSSMASVCGSSLAMMDAGVPLKSAVAGIAMGLVKEGNDFVVLS
DILGDEDHLGDMDFKVAGTADGVSALQMDIKVDGITEEIMRSALAQAKRGRLHILGEMAK
CITEARSEMSEFAPRLLTIKIHPDKIREVIGKGGATIRSITEETGTTIDITDDGNVVIAS
VNREAAEAARKRIEQIVSDVEPGRIYEGKVAKLMDFGAFVTIMPGKDGLVHVSQISSERV
EKVSDKLKEGDIVKVKVLEVDKQGRIRLSMKAVTEDENVTG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagtaaccaagtcattccagtacggtagtcacgaagtcacactggagacgggc
gaaattgcccgccaggcctccggtgcagtcatggtcagcatgggcggcactgtcgttctg
gtcactgtcgtcgctgcccccaaggcgcgcgatggccaggacttcttcccgctcacggtc
gactacatggagaagttctactccgcgggtcgtatcccgggtggcttcttcaagcgcgaa
ggccgtccgaccgagaaggaaacgcttacctcgcgcctgatcgatcgtccgcttcgtccg
ctgttcccggaagagttccgcaacgaaatccaggtcatcgcgcaggtcgtgtcgctgaac
ccggaagtcgacggtgacatcccggcgctgatcggcgcttccgctgcgatgcgtctcgcc
ggtgtgcccttcaagggcccgatcggtgcagctcgcgtcggttacgccggtggccagtac
atcctcaacccgaccgctgcccagctgaagacctcggacctcgacctcgtcgtggccggt
acctccagcgcggtgatgatggtcgagtcggaagccaagctcctcagcgaagacgtcatg
ctcggcgcggtggtcttcggtcaccagcagatgcagctcgcgatcgacacgatcaacgcc
ttcgtcgccgaagccggcgtcaagacgttcaagtgggaagctccggtcgccaagacggcg
ctgtacgacgcggtcaagtccgctgtcggcaaccgcttcaccgaagccttccagatccgc
gacaagctggcccgtcgtgacgtcgtcagcgcgctcaagagcgacgtgaagacggctatc
gccgccgatgccgaagccaacggctggaccgatgccgacatcggcaacgcgtttggcgaa
gtcgagtaccgcaccctgcgcgacggcgtgctcagcacgaaggtccgcatcgacggtcgt
cagctcgacgacgttcgcccgatctcggtgcgcgtcggcgtcctgccgcgcacgcacggt
tcggcgctcttcacccgcggtgaaacgcaggccctggtcgttgccaccctcggcaccacc
cgtgactcgcagctcatcgacgcgccggaaggcgagtggaaggatacgttcctcttccat
tacaacttccctccgttctcggtcggtgaaaccggtcgcgtcggtagcccgaagcgtcgc
gaaatcggtcacggccgcctcgccaagcgtggcgtgcaggctgtcaagccgacgatcgaa
gagttcccgtacgtgatccgcgtcgtctcggaaatcaccgagtcgaacggttcgtcgtcg
atggcgtcggtctgcggttcgtcgctggccatgatggacgcgggcgtcccgctgaagtcg
gctgttgccggtatcgccatgggcctggtgaaggaaggtaacgacttcgtcgtcctctcc
gacatcctcggtgacgaagatcacctcggcgacatggacttcaaggtagccggtaccgcc
gatggcgtgtccgcgctgcagatggacatcaaggtcgacggcatcaccgaagagatcatg
cgttcggcgctggcccaggccaagcgtggtcgcctgcacatcctcggcgagatggccaag
tgcatcaccgaagcccgctcggaaatgagcgagttcgcaccgcgcctgctcacgatcaag
atccacccggacaagatccgcgaagtgatcggcaagggtggcgcgaccatccgttcgatc
accgaagagaccggtaccacgatcgacatcaccgatgacggcaacgtggtcatcgcgtcg
gtcaatcgcgaagccgccgaagccgcgcgcaagcgcatcgagcagatcgtttcggacgtc
gagccgggccgcatctacgagggcaaggtcgccaagctgatggacttcggcgctttcgtc
acgatcatgccgggcaaggacggtctcgttcacgtctcgcagatctccagcgagcgcgtc
gagaaggtctccgacaagctcaaggaaggcgacatcgtcaaggtcaaggtcctcgaagtc
gacaagcagggccgtatccgcctgtcgatgaaggccgtcactgaagacgagaacgtcacg
ggctga
DBGET
integrated database retrieval system
