Latilactobacillus sakei subsp. sakei: LCA_0137
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Entry
LCA_0137 CDS
T00299
Name
(GenBank) Putative DNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03420
Nucleotide excision repair
lsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCA_0137
03430 Mismatch repair
LCA_0137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_0137
Enzymes [BR:
lsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCA_0137
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCA_0137
MMR (mismatch excision repair)
Other MMR factors
LCA_0137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
Viral_helicase1
AAA_19
AAA_30
PhoH
UvrD_C
DEAD
NACHT
AAA_12
LpxK
AAA_16
Pox_A31
FliJ
Motif
Other DBs
NCBI-ProteinID:
CAI54434
UniProt:
Q38ZE3
LinkDB
All DBs
Position
129322..131613
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AA seq
763 aa
AA seq
DB search
MTDVQKSLEQSRLTEIIGLIKKAETHFEGAVKRAKSEEKEINENFFNDVRLNFNNDSAMT
ETAVSIEQQRQMLQERNHSWQQSSRQLETLQKMEKTPYFARVDFQEKGEPKSESIYIGLG
SFTDTDDHFLIYDWRAPISSIYYEGKTGAVTYQTPDGPQDVNISLKRQFLIEDGQIKALF
DTQETIGDQMLLEVLGEKSDTQMKSIVTTIQREQNQIIRNTDADLLFVQGAAGSGKTSAI
LQRIAFLLYRYRGNLDSSQVIMFSPNQLFNDYIADVLPELGEQNMIQMTYFQYVARRLPN
MAVQSLFDQFETPVNETDGRISRLKESLVFYKAVKKYAAHLEKADMRFRDMKVKGRVLIT
KEHISEVYYRFNENYHLGNRLDATKESLLRTLSHKVDHETKADWVTEQAENMSDEEIREL
MSGKDFKTGDAESKFIAKQIVLEAFKPVRRSIQRNRFLSIQAQYIHFLRVVPQLVKLADF
DITEEQWQDHVTHFVAQLKAKQMTLQDVTPYLHLYDLMTGKKGERDMRFVFIDEIQDYTP
YELAFLKLHFPKARFTLLGDLNQAIFTKGNSTNLLQQVQQLFDAQNTKVVQLTRSYRSTQ
QVTDFTKGLLKGGQAIEAFNRVGDKPNLIVRQSEAELVADVNRQLAANEADELSTAIITK
TLVQAQELTKMLKETGTKVTLIRSENQRLAAGTLVVPSFLAKGLEFDAIIGWQISAANYN
HEDQRQLLYTICSRAMHRLTLLATDALSPLIDNVDPEKYTLTK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
ttgactgacgtacagaaatcattggaacaaagccgattaacagaaattattggtttaatt
aaaaaagctgagacccattttgaaggggctgttaagcgcgcaaaatcggaagaaaaagaa
attaacgagaacttcttcaacgacgttcgccttaacttcaataacgattccgcgatgact
gaaaccgccgtttcgattgaacagcagcggcaaatgctacaagaacgcaatcactcgtgg
caacaatcttcacggcaattggaaaccttgcaaaagatggaaaagacgccatactttgcc
cgtgttgattttcaagaaaagggtgaacctaaatccgaatcaatttatatcgggttaggc
tcatttacagataccgacgatcatttcttaatttatgattggcgggcaccaatttcatca
atttactatgaaggtaagacgggcgctgtgacgtaccaaacaccagacggtccgcaagat
gtgaatatctcacttaagcgtcaatttttgattgaagatggccaaattaaggccttattt
gatacgcaagaaacgattggcgatcaaatgttattagaagtgttaggtgaaaaatctgat
acacagatgaagagtatcgtgacgacgattcaacgtgaacaaaatcagattatccgtaat
accgatgctgatttgttattcgttcaaggggcagctggctcagggaaaacgtcagctatc
ttgcaacgcattgcgtttttactctatcgctatcgggggaatttagattcgagccaagtg
atcatgttctcgcctaaccaattattcaacgactacatcgcagatgtgttgcctgaattg
ggcgaacaaaatatgattcaaatgacttacttccaatatgtggcacgccggttaccaaac
atggcggtccagagcctctttgatcaattcgaaacaccagttaacgaaaccgatggccgg
attagtcgcttgaaagaaagtctcgtcttttataaggctgttaaaaagtacgctgcacat
cttgaaaaagccgacatgcgcttccgcgatatgaaggtcaagggccgcgtcttaattact
aaggaacacatcagcgaggtttattaccggtttaatgaaaactaccatctcggcaatcga
ttagatgccactaaagaaagtttgttgcggacattgagccacaaggttgatcacgaaacc
aaggccgactgggtgactgaacaagccgagaatatgagtgatgaagaaattcgcgaattg
atgtctggtaaagatttcaagacgggcgatgctgaaagcaagtttattgctaagcagatc
gtgctagaagcgttcaaacccgttcgccggtctattcaacgcaatcgcttcttaagcatc
caggcgcaatatattcacttcttacgggttgtgccacaacttgtgaagttagccgatttt
gatattacagaagagcaatggcaagaccacgtcacgcattttgtcgcacaattgaaggct
aagcagatgacgttgcaagatgtcacaccttatcttcacctctacgatttgatgacgggt
aaaaaaggtgaacgtgatatgcgttttgtcttcatcgatgaaattcaagattacacgcct
tatgaattggccttcttgaagctccacttccctaaggcgcgcttcacattattgggcgat
ttgaaccaagcgattttcactaagggtaacagcacaaatctcttgcaacaagtgcaacaa
ttatttgatgcccaaaatacaaaagtggtgcaattaacgcgttcatatcggtcaacgcaa
caagtgaccgactttaccaagggcttattaaaaggtggccaagccatcgaagccttcaac
cgagttggcgataaaccaaacttgattgtgcgccaatcagaagctgagttagtggctgat
gttaaccgccaattagccgcaaatgaagcggatgaattatcgacggcgattattaccaag
acattggtgcaagcccaagaattgacgaagatgctcaaggaaacgggaaccaaagtcacc
ttgattcgttccgaaaaccaacgtttagcagccgggacattagtggtcccaagtttctta
gctaaaggtttggaattcgatgccattattggctggcaaatcagtgccgccaactacaat
catgaagatcaacggcaattgctctacacgatttgttcaagagcaatgcatcgcttgacc
ttgttagccactgacgcactctcaccactgattgataacgtcgatccagaaaaatataca
ttaacaaaataa
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