Latilactobacillus sakei subsp. sakei: LCA_0187
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Entry
LCA_0187 CDS
T00299
Name
(GenBank) Putative drug-resistance ABC transporter, two ATP-binding subunits
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCA_0187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsa02000
]
LCA_0187
01504 Antimicrobial resistance genes [BR:
lsa01504
]
LCA_0187
Transporters [BR:
lsa02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LCA_0187
Antimicrobial resistance genes [BR:
lsa01504
]
Gene variants
Macrolide resistance genes
Transporters
LCA_0187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
nSTAND6
AAA_18
TsaE
AAA_23
AAA_15
AAA_16
NACHT
MeaB
AAA_24
AAA_7
AAA_28
MMR_HSR1
RsgA_GTPase
DUF815
NTPase_1
DUF5906
FtsK_SpoIIIE
AAA_19
VapE-like_dom
AAA_27
AAT
Motif
Other DBs
NCBI-ProteinID:
CAI54484
UniProt:
Q38Z93
LinkDB
All DBs
Position
complement(179705..181216)
Genome browser
AA seq
503 aa
AA seq
DB search
MGTIQFKQLTFNYPDQATPLFKDVTLQFDASWRLGLIGRNGRGKTTLLKLLQRQLDFDGQ
LITDLDFHYFPQTVADPSQLTRDILMTLGQLDNSTFWQIERELNLLKVDLDCLWQPFNTL
SPGEQTKALLALLFIDEHHFQLIDEPTNHLDQDGRDTVAHYLQQKTGFIVISHDRYFLNQ
VIDHVLSINRADITVQQGDYQTWQTNQEQQTQSEQHQNSLLKSEIKRLNQTAQQKSQWSQ
QAERGKNAASVKNESANLDKGFIGHRAAKVMKRATTITARSEQAATEKQSLLKNVEITAP
LTINNQSLKPQQIVLTATDLVLEQDGRALNQPLSFELKAGQQVALTGANGTGKSTFIKAL
LALPEMQHQVSGQLTIASRIKVSYLPQDFAQLSGSLADFAAAKQVSLEQLLSTLRKLGFE
REQFNHRLETMSMGQKRKAALARSLCEEAQFYVWDEPLNYLDVITREQLQTLIVQTCPTL
LFIEHDRDFIDGVASQRYQLIPR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaatccaattcaaacaattaacattcaactatccagatcaagcgactcccctt
ttcaaagacgtcacacttcaattcgatgctagctggcgcttaggcttaatcgggcgcaat
ggccggggaaaaacaacgctgttaaaattactccaacgtcaattagactttgacgggcaa
ttgataactgatctagattttcactattttccacaaaccgtcgctgatcccagtcaacta
acccgcgacattctaatgacgctcggtcaattagataacagtactttttggcaaattgaa
cgggaactcaatttactcaaagttgatctcgactgtctctggcaaccgttcaacacactg
agtcccggtgaacaaactaaggcgctcttggcgttattattcatcgatgaacaccatttt
caactgatcgatgaaccaaccaaccatctcgatcaagatggtcgcgacaccgtggcccac
tatttacagcaaaaaacaggcttcatcgtcatcagtcatgatcggtactttttaaaccaa
gtcatcgatcacgtcttatcaatcaaccgagcagatattaccgtccaacaaggcgattat
caaacctggcagaccaaccaggaacagcagacccaatctgaacaacatcaaaacagcctg
ctaaaaagtgaaattaaacggttaaatcaaacagcccaacaaaaatcccagtggtcacaa
caggctgaacgtggtaaaaatgcggcaagtgtcaaaaatgaaagtgctaatcttgataag
ggcttcattggacaccgtgccgctaaggtgatgaagcgtgctacaacgattactgctcgt
agtgaacaagcggctactgaaaaacaaagtctgcttaaaaacgttgaaattaccgcacca
ctgacgattaacaatcagtctttaaagccgcaacaaatcgtcctaaccgcaaccgaccta
gtacttgaacaagatggtcgcgccctaaatcagccgctatcatttgaactaaaggccggc
caacaagtcgcattaaccggcgctaacggtacgggaaaatcaacctttatcaaagcccta
ctcgcacttcctgaaatgcagcatcaagtcagtgggcagttgaccattgcgtcgcgaatc
aaggtttcttatttaccacaagattttgcgcagctcagtggctctctagctgactttgca
gccgccaagcaggtatcactagaacaattactctcaactttacggaaactgggttttgag
cgggaacaattcaaccaccggcttgaaacgatgagtatggggcaaaaacgtaaggccgcc
ctcgctcgttcgctttgtgaagaagcccaattttatgtctgggacgaaccgttaaactac
ctagatgtcattacgcgcgaacaactccaaacattaattgtccaaacctgcccaacactc
ttgttcatcgaacatgaccgcgattttatcgacggtgtcgctagccaacgttatcaattg
attccacgctaa
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