Latilactobacillus sakei subsp. sakei: LCA_0326
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Entry
LCA_0326 CDS
T00299
Name
(GenBank) Putative DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03420
Nucleotide excision repair
lsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCA_0326
03430 Mismatch repair
LCA_0326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_0326
Enzymes [BR:
lsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCA_0326
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCA_0326
MMR (mismatch excision repair)
Other MMR factors
LCA_0326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
AAA_19
UvrD-helicase
AAA_30
Viral_helicase1
NACHT
UvrD_C
DEAD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CAI54627
UniProt:
Q38YV0
LinkDB
All DBs
Position
complement(328744..331041)
Genome browser
AA seq
765 aa
AA seq
DB search
MLQEDTQQQEQARVDLTVDQVNQRLTVINQQLDNAYNETKDIEQRYGDTTKVNITEVDDR
METNAAVQQQKQLVAAAVENEKLLTSQQKRLTDLVDSPYFGRIDINEDGEEESLYIGTAT
FINEQDQFLVYDWRAPIASIYYNGTLGTVSYDTPNGPVKVDLTLKRQFKIKNGQIEHLFD
TNETVGDELLQAILGQQSDEYMQNIVATIQKEQNDIIRDTTADLLIVQGVAGSGKTSAVL
QRIAFLLYHSRSHLEADQMVLFSPNRLFSHYISEVLPSLGEKNMRQVTMAEFLSHRFSGL
QVETLFDRFEKDQASFPEMTQAIRRFKESAPFMQQITDYVKQVSTQPLAFNDLYFEDRPF
FTKAQINKIYLDLPHNMRPGDKFIATKNTLIKRLKRQINLEVHLDWVAEKIDTLSDDDYR
AIVGDREFDSGDLEQAFIAREIVQNYFADLYDAIYNDYFLDVYTEYQNFLRTACPATIPV
AVWEAMIETVAQNNERHLVGLSDAAPILYLRDLLTDSGQNHSIQYLFVDEMQDYSIAQFV
YLQHAFPNAKFTVLGDYAQDVFTATYQAGNFIERLCAAFPKLKTNQISLTKSYRATAPIT
NFAKALLPKETALQAFSRDGRLPRVITATKEASLNALTQEIFHLQKRHATIAILTKDQQT
ARQLFASLTPDDQVTLISETTRSLPKGVLVLPLYLAKGLEFDAVIGYDISATTFGQSSDV
DLLYTLMTRAMHDLTLLGIGTLSPLITSLDPQYYQNVTTTKETIA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgctacaagaagatacgcaacaacaagaacaagcccgtgttgatttaacggttgaccaa
gtcaatcaacggctaacggttatcaaccagcaattggacaatgcctataatgaaactaaa
gatattgaacaacgttatggtgatactaccaaggtcaatattacggaggtcgatgaccgg
atggaaaccaatgccgccgtccaacagcaaaaacaactagtcgcagcggccgttgaaaac
gaaaaactcctaacgtcacaacaaaaacggctaacggatttagtcgactctccttatttt
ggtcggattgatatcaatgaagacggtgaggaagaatcactctacatcgggaccgccact
tttatcaacgagcaagaccaattcttggtttacgattggcgagcacccattgctagtatt
tactataatggcacattagggaccgtcagttacgacacgcctaatggccccgttaaagtt
gatttaacactaaaacgacagttcaagattaaaaacggtcaaattgaacatctttttgat
acaaacgaaacagttggcgacgaactcctgcaagccattctcggccaacaaagtgatgag
tacatgcaaaatatcgttgcaacaattcaaaaagaacaaaatgatattatccgtgatacg
actgccgatttactaattgtccaaggcgtcgctggcagcggtaaaacctccgctgtttta
caacgcatcgctttcttactctatcacagtcgtagtcacttagaagccgatcaaatggtc
cttttttcacctaatcgcttattcagtcactatatttctgaggtgctgcctagtttaggg
gaaaagaatatgcgccaagtgacgatggctgaatttttaagtcatcgtttctcggggctt
caagttgaaacactcttcgatcgttttgaaaaagaccaagcgagtttcccagaaatgacg
caagcaatacgccgctttaaagaaagtgccccctttatgcaacaaattacggattatgtt
aaacaggtttctacacagccattggccttcaatgacctctactttgaagatcgtccgttc
ttcacaaaagcgcaaattaataaaatttatctcgatctcccacataatatgcgtcccggt
gataaatttattgccactaaaaataccctcattaaacgactcaaacgccaaattaattta
gaagtgcaccttgattgggtcgctgaaaaaattgataccttatcagatgatgactaccgt
gccatcgtcggtgatcgcgaatttgattctggcgatttagaacaagcatttattgcccgg
gaaattgttcaaaattattttgctgatttatacgatgctatttataacgattactttttg
gatgtgtatactgaatatcaaaacttcctacggacagcttgtccggctacaattccggtt
gccgtttgggaagcaatgattgaaacagtcgctcaaaataatgaacgccacctcgtcggt
ttaagtgacgcagcgccaattctgtatctccgtgatttattaaccgatagtggtcaaaat
cacagcattcaatacttattcgtcgatgagatgcaagattatagcattgcgcaattcgtt
tatctccagcatgctttcccgaacgctaaattcaccgtgctcggcgattacgcgcaggac
gtctttaccgctacttatcaagccggtaatttcattgaacgcctctgcgcggcttttcca
aaactaaaaactaaccaaattagtttgacgaagagctatcgcgcgactgcccccatcacg
aatttcgcaaaagccttattgcctaaagaaacagccttgcaagcctttagtcgtgatgga
cggctccctcgtgtcatcacagccactaaggaagctagtttaaatgccttaacgcaagaa
attttccacctacaaaaacggcatgcaactatcgccattttaaccaaggatcaacaaacg
gcgcgccaacttttcgccagcctgactcccgatgatcaggtaacactcatctccgaaacc
acccgctcattgccaaaaggtgttttagtattaccgttatatctcgctaaaggtctcgaa
ttcgatgctgtcattggttacgacatttcagcaaccacctttggccaatcaagtgacgtt
gacttactctacacactgatgacgcgtgccatgcacgacttaaccttgttgggaattggt
accctcagtccactcattactagcctcgatcctcaatactaccaaaacgttacaaccact
aaggaaacgattgcctaa
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