Latilactobacillus sakei subsp. sakei: LCA_0359
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Entry
LCA_0359 CDS
T00299
Symbol
groL
Name
(GenBank) Chaperonin GroEL (60 kDa chaperonin) (Protein Cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCA_0359 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsa03019
]
LCA_0359 (groL)
03110 Chaperones and folding catalysts [BR:
lsa03110
]
LCA_0359 (groL)
03029 Mitochondrial biogenesis [BR:
lsa03029
]
LCA_0359 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsa04147
]
LCA_0359 (groL)
Enzymes [BR:
lsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LCA_0359 (groL)
Messenger RNA biogenesis [BR:
lsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCA_0359 (groL)
Chaperones and folding catalysts [BR:
lsa03110
]
Heat shock proteins
HSP60 / Chaperonin
LCA_0359 (groL)
Mitochondrial biogenesis [BR:
lsa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LCA_0359 (groL)
Exosome [BR:
lsa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LCA_0359 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LCA_0359 (groL)
Exosomal proteins of breast cancer cells
LCA_0359 (groL)
Exosomal proteins of colorectal cancer cells
LCA_0359 (groL)
Exosomal proteins of bladder cancer cells
LCA_0359 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAI54660
UniProt:
Q38YR7
LinkDB
All DBs
Position
358702..360327
Genome browser
AA seq
541 aa
AA seq
DB search
MAKELKFSEDARSKMLAGVDQLANTVKTTLGPKGRNVVLEKAYGSPEITNDGVTIAKAIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLAQAIIREGMKNVTAGANPVGIRRGIE
LATREAVKKLHEISHKVESKDAIAQVAAVSSANEETGRLIADAMEKVGNDGVITVEESKG
IDTELSVVEGMQFDRGYLSQYMVTDNDKMEADLDNPYILITDKKISNIQDVLPLLQSIVQ
EGKALLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKEQLEDIATLTGATVIT
SDLGLELKETTIDQLGTAGKVTVTKDDTTIVEGAGSKSAIAERVENIKKQIAETTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKEQKYRIEDALNATRAAVEEGYVAGGGTALIDV
IESVAALEEEGDVQTGINIVLRALEEPVRQIATNAGLEGSVIVEKVKSQPVEVGYNAANG
NWENMIEAGILDPTKVTRSALQNAASVAALMLTTEAVVADKPEDNPAPAAGMDPSAMGGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaacttaaattttcagaagacgcacgttcaaaaatgttagcaggtgttgat
caattagctaacactgttaagacaacattaggaccaaaaggccgcaacgttgttttggaa
aaagcttacggttcaccagaaatcactaacgatggtgtgacaatcgctaaagcaatcgaa
ttagaagatcattttgaaaatatgggtgccaaattagtttctgaagttgcttcaaaaacg
aacgacatcgccggtgacggtacaacaaccgctactgttttagcccaagccattattcgc
gaagggatgaagaatgtgacagccggtgctaacccagttggtatccgtcgtgggattgaa
ttagcgactagagaagctgttaagaagttacacgaaatttcacacaaagttgaaagcaaa
gatgcgattgcccaagttgctgctgtttcatcagctaacgaagaaacgggtcgtttaatt
gctgatgctatggaaaaagtgggtaacgacggtgtcatcacagttgaagaatcaaaaggg
attgatactgaattaagcgttgttgaagggatgcaatttgatcgtggttacttgtcacag
tacatggtgactgacaacgacaagatggaagctgacttagacaacccatacattttgatt
acagataagaagatttcaaatattcaagatgttttaccactcctacaatcaatcgtgcaa
gaaggtaaagccttattaatcatcgctgatgatgttgatggcgaagcattaccaacactt
gtcttgaacaagattcgtggaacattcaacgtggttgctgttaaggcccctggttttggt
gatcgtcgtaaggaacaattagaagacatcgcgacattaacaggtgccacagtgattacg
agtgatcttggtctagaattgaaagaaacaacaatcgatcaattagggacagctggtaag
gtaactgttacaaaagacgatacaacaatcgttgaaggtgctggtagcaaatcagctatc
gcagaacgtgttgaaaacatcaagaaacaaattgctgaaacaacatcagactttgatcgt
gaaaaattacaagaacgcttagctaaattagctggtggcgttgcagtgatcaaggttggt
gctgccacagaaacagaattgaaagaacaaaaatatcggattgaagatgccttaaatgca
acgcgtgcagctgttgaagaaggctacgttgccggtggtgggacagcattaatcgatgtc
atcgaaagtgttgccgctcttgaagaagaaggcgacgttcaaacagggattaacattgtg
cttcgtgcattagaagaacctgttcgtcaaatcgcaacaaacgctggtcttgaaggctca
gtcattgttgaaaaagtaaaatcacaacctgttgaagttggctacaatgcagcaaacggc
aactgggaaaatatgattgaagcgggtatcttagatccaactaaggtaacacgctcagca
ttacaaaacgcagctagtgttgctgctctaatgttaacaactgaagcagtggttgctgac
aaaccagaagacaacccagcaccagcagcaggcatggacccatcagcaatgggcggcatg
atgtaa
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