Latilactobacillus sakei subsp. sakei: LCA_0625
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Entry
LCA_0625 CDS
T00299
Name
(GenBank) Putative metal-dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsa03019
]
LCA_0625
Messenger RNA biogenesis [BR:
lsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCA_0625
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
CAI54929
UniProt:
Q38Y00
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All DBs
Position
628845..629813
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AA seq
322 aa
AA seq
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MTTKKLFDYQNDENLALFVLIKAADVRVAKNGKQFIAFTFQDQSGQISGKYWDASDEDVA
LFTPGKIIHLQGKRELYQSNPQIKIYKLRLATEEEPQVIEQFIQKAPVQTADMEEEISQV
LFEITNPNWQRLVRHLIQKHQADFFSFPAAKTNHHAFAGGLAYHTLSMLRLAKTIAAQYP
QIDAALLYSGVLLHDLGKTLELSGPVSTEYTVRGNLIGHIVLVDEEIVKACETLKIDINS
EDMLVLRHVVLAHHGLMEYGSPVRPQILEAEVLHQIDEMDASITMMTQSLQHAEAGQYTE
RLFAMDGRHFYRPVNDQQLTQD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaaaaagctatttgattaccaaaatgatgaaaacttagcgctatttgtttta
attaaagcagcggatgtcagagttgctaaaaacggcaagcaatttattgccttcacattc
caagatcaatccggacaaattagtggtaagtattgggatgcttctgatgaagatgtggcc
ttatttacaccggggaagattattcatctccaaggtaaacgggaactttatcaaagtaat
ccacaaattaagatctataaacttcggttagcgactgaagaggaaccacaggtcattgaa
caatttatccaaaaagcaccggtacaaacggccgatatggaagaagaaattagccaagtg
ctttttgaaattaccaatcctaattggcaacgattggtgcgccacttgattcaaaagcat
caagcggacttcttcagttttccagcggccaagactaaccaccacgcttttgcgggcggg
ctagcctaccatacgttatcgatgttgcgactagctaaaacaattgccgcccaataccca
caaattgatgcggcgttattgtattcaggggtcttgttgcacgatttaggtaagacgctt
gaattatcggggccggtttcaacggaatacacagtgcgcgggaatttaatcgggcacatt
gtgttagttgatgaagaaatcgttaaggcttgtgagacgctaaaaatcgacatcaatagt
gaagatatgttagtgctgagacatgttgtcttagctcatcacggtttaatggaatatggt
tcaccagtgcgaccacaaattttggaagcagaagtactccatcaaatcgatgaaatggat
gctagcattacgatgatgactcaatccttgcaacatgcagaagcggggcagtatactgaa
cggctctttgcaatggatggacgtcatttctaccgacccgttaacgatcaacaattaacg
caggattaa
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