Latilactobacillus sakei subsp. sakei: LCA_0879
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Entry
LCA_0879 CDS
T00299
Symbol
recO
Name
(GenBank) DNA repair protein O
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LCA_0879 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_0879 (recO)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LCA_0879 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LCA_0879 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
CAI55180
UniProt:
Q38XA1
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All DBs
Position
864850..865668
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AA seq
272 aa
AA seq
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MAEHRFEDFNGLVMYRKNYKEKDMLVKILTDRFGKKMFYLRGANKPKFRLSAAILPFTQA
EYGGDIRDDGLSFLNNVKSATQFQTISQDLFLNAYATYILNLIDVGFPDSEPLGIWYDKV
EQALNLIDEGFDAAMITHIIEIQLLQVFGVQPQLQGCAVCGRTDLAFDYSESYGGLLCQR
HWHLDPNRFHSSQRAIYYLRLFSVIDLFKIQSVNVKEATQVELKMIIDRLYQDTVGLSLK
SKQFIDKMYSFDSQLPQLKKVPSEIDSTPKDD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacatcgatttgaagactttaacggtctagtgatgtatcgaaagaattataaa
gaaaaagatatgttggttaagattttaaccgatcgttttggtaaaaagatgttttacttg
cgtggggccaataagcctaaatttcgtctaagtgcggctattttgccgtttacgcaggcc
gaatatggcggcgatattcgcgatgatggcttatcatttttgaataatgtgaagtcagcc
acgcaatttcaaacgatcagtcaggatttatttttaaatgcttatgcgacttatatcctg
aacttaattgatgtcggctttccggacagtgaaccattaggcatctggtatgataaggtt
gaacaggcgttaaatctgattgatgaaggttttgatgcggcgatgattacccatattatt
gaaattcaattactacaggtgtttggcgtccaaccgcaattacaaggatgtgccgtttgt
ggccgaaccgatttagcgtttgattactctgagagttatggggggcttttgtgccaacgt
cattggcatttagatcccaatcgtttccacagtagtcagcgggcaatctattatctccga
ttgttttccgtgattgatctgtttaagattcaatcggtgaacgtgaaggaagccactcag
gtcgaactcaaaatgattattgaccgactctatcaagatactgtgggcctgtcattgaag
agtaagcaattcatcgacaagatgtacagtttcgatagtcaattaccacaattaaaaaaa
gtgccgtcagaaattgacagcacaccaaaagacgactaa
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