Latilactobacillus sakei subsp. sakei: LCA_0909
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Entry
LCA_0909 CDS
T00299
Symbol
rexB
Name
(GenBank) ATP-dependent exonuclease, subunit B (ATP-dependent exonuclease, subunit B)
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_0909 (rexB)
Enzymes [BR:
lsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCA_0909 (rexB)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LCA_0909 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
CAI55211
UniProt:
Q38X70
LinkDB
All DBs
Position
894068..897628
Genome browser
AA seq
1186 aa
AA seq
DB search
MSLKFILGTASYDHHQALVTNLKATFQEKPQERYFYLVPNHIKFESEVSILEALKSDEND
YVAASQIQVFSLTRLAWYFMKNTPYYQIPRISTAGLNMLVFRLLQEHQEQLQLFRGEVRH
TGFVAQLTKQLLELKIGCITPADLTAMAENLGDQQVELAKKLHDLTIIATAFEAAMQKRF
IENTALIDALTLFLQQQTLTDCHFYVEGFAQFTAQEQALLTTLMQQSEVQIGFILDRAYP
NQQPDGLNFFFQAGRTYYNLYQQARLNHVPVMMDQMADSQRLTPALAALDQFWVSSESPG
NRKLSPVPVADHLHVVAAENRYAELRYVAREIRRLVQTGHYRYRDFLILTRHLAPYQTMI
APILTEYEIPYFCDLPQTMAAHPLVSLLEKLLDVNLHFYRYEDVMALLKTELLIPKGMSI
AEFRADLDLCENLILKNGYEGKDWLNDFDWQFYRFGSYQEGTRTTQDEALTERINGIRRY
VQATLPPFYRALKAAKTGRQVVQVLYQFLIDHGVDRQLLHWRDQALAANQVAQAGQPEQT
WSTFMQMLDEYVTLLGDVSFEEDNTEQLNEFKQLLSAGFAAAQYAQIPSTLDQVVLSESG
MVQTKKRQITFMIGSTDQVMPDQIENTALLTDQDRQRLLDNEGQVTPLLNESSVGKMNAE
PYLNYLAFLSSQTTVYFTYPLGNGEGTAFKISPYVERIRNHFDLTIQKIAAEQSLQSTET
PQGSWRSLLSDLIQVSRQAQENQTLIPEQWLTTYRLLQQAPQSQFLTTQLFQSLNYRNEP
ERLTPEIVTGLYGNEIHTSISKLEEFYQNQYAYFLKYGLKLQERPVFELTPANTGNFYHE
VMDRFIKLIQGQQIALPELDDQQIDKLVSEVLAKTYEQPEFKILNKTARMGYIRQQLMQT
VKRVSLALRNQSLSTNLRPLATEVLFGQVGAEKGLQGLNFMLDDHREVKVRGKIDRIDQL
TINNQPYLGIVDYKSSQHSFNFRDAYYGLALQMLTYLETVLQDQQAILPANSAVKPAGAF
YLHLKNPTLTLKQLTKKKMGQLQKGEFDQMLLDQFKYNGLIVNDEELLENLDTTLVNGQS
PLFAFSKLKSGKFSSKQLVTLNQLDLLMAHNEDLIKEAGQAIFAGDTALNPIMRPDRTNA
LTLSPFKSIFQFDAMLPENNYRQLEALDEKAVLERLMSKKGDGNLE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaaatttattctaggaaccgcaagttatgatcaccaccaagcgctcgtcact
aacttgaaggctactttccaagaaaaaccgcaagaacgctatttctatttagtgccgaac
catattaaattcgaatcagaagtttctattttagaagcacttaagtcagatgaaaatgat
tacgtcgccgcttctcaaattcaagttttttcattgacgcgattagcgtggtattttatg
aaaaatacgccgtattaccaaattccgcgtatctcgacggccggtttaaatatgttggtt
tttcggttattgcaggaacatcaagaacaactgcaattattccgtggtgaggtcagacat
accggctttgtggcccaattaacaaaacaattacttgaacttaagattggttgtatcaca
ccggcagatttaactgcgatggctgaaaatctcggtgatcaacaagtcgaactcgcaaaa
aaactacatgacctaaccattattgcgaccgcttttgaagcagccatgcaaaaacgattt
attgaaaacacagccctaatcgatgctttgaccctctttttgcagcaacaaacgctaaca
gattgccatttctacgtggaaggctttgcacaatttacagcgcaagaacaagcattatta
accactttgatgcaacaatcagaggtacaaatcggatttatcttagacagagcttaccct
aatcaacaacccgatggtttgaattttttctttcaagccggtcggacctactataattta
tatcaacaagcacgcctgaatcacgtaccagtcatgatggaccagatggcagacagtcag
cgcttaacaccagctttggcagcacttgatcaattctgggttagttctgaaagcccaggt
aatcgaaaactaagcccagtgccggttgctgatcatttacatgttgtagcggctgaaaat
cgttacgccgaactacgttatgtcgcccgtgaaatccggcgcctagtgcaaactggccat
tatcgctaccgggatttcttaatcttgacgcgtcacttagcaccatatcaaacaatgatt
gcgccgattttaacggaatacgagattccgtatttctgtgatttaccacaaacaatggcg
gctcatcccttagtatcactattggagaagttattggacgttaaccttcatttttaccgg
tacgaagatgtcatggcattattaaaaactgaattgttgattcctaaaggcatgtcgatt
gccgaatttagagctgatttagatctctgcgaaaacttgattttaaaaaatggctacgaa
ggcaaggattggttaaatgattttgattggcaattctatcgtttcggttcttatcaagaa
ggcacgcggacgacccaggatgaagccttaacggaacgcattaatggaattcggcgctac
gtacaagcaactttaccgccattttatcgtgcactgaaagcagccaaaactggtcggcaa
gtggtccaagtactctatcaatttttaattgatcatggtgttgatcggcaattattgcat
tggcgagatcaagcattagctgctaatcaagtggctcaagctggtcaaccagaacaaaca
tggtcgacctttatgcaaatgcttgatgaatacgtcaccttgttaggggatgtgtcattt
gaagaagataatactgaacaactaaacgaattcaaacagctgctttcggccggttttgcg
gcagcccaatatgcgcaaattccctcaacccttgatcaagttgtcctctctgaatcgggg
atggttcagacgaagaaacgccagattacctttatgattggttcgaccgatcaagtcatg
ccagatcagattgagaatacggcattattaaccgatcaagatcgccaacgcttattggat
aatgagggccaagttacgccgttattaaacgagtctagcgtcggcaaaatgaatgctgag
ccgtacttgaactatctcgcttttttaagtagtcaaacaacggtttattttacgtatcca
ctaggaaatggcgagggaacagccttcaaaatttctccctacgttgaacgtattagaaat
cattttgatttaacaattcaaaaaattgcggctgaacaatcattacaaagcacagagaca
cctcaaggttcatggcgcagcttgttaagtgatctcattcaagtcagtcgacaagcgcaa
gaaaatcagacgttgattccagaacagtggttaacgacgtatcgactcttgcaacaagca
ccgcaaagtcagttcttaacaacacaattattccaaagtcttaattaccgcaatgaacca
gagcgcctaacacctgaaattgtcactggtttatatggcaatgaaattcatacgtcaatt
tcaaaactagaagagttctatcaaaatcagtacgcttatttcttgaaatacggtttaaaa
ttacaagaacggcctgtttttgaattaacaccggctaatacggggaacttttaccacgaa
gtgatggatcgctttattaaactgattcaaggccaacaaattgcactcccagaattggat
gatcagcaaattgataagcttgtcagtgaagtcttggctaagacctatgaacaacccgag
tttaagattttgaacaagacggcgcgcatgggctatattcgccaacaattgatgcaaact
gtcaaacgcgtcagcttagcacttcgcaatcagagcctctcaaccaacttacggccatta
gcgaccgaagtcttatttggtcaagttggcgcagaaaaagggctccaagggttaaacttc
atgttagacgatcaccgtgaagtaaaggttcggggaaagattgaccggatcgaccaattg
accatcaataaccaaccctacttaggaattgttgattataaatctagtcagcacagtttt
aatttccgggatgcttactatggtttggccttacagatgttgacctatctcgaaacggtc
ttgcaagatcaacaggccattttaccagcgaatagtgcggtgaaacctgccggtgccttt
tacttacatctgaagaatccgacattgaccctcaaacaattaaccaagaaaaaaatgggt
caactccaaaaaggcgagttcgatcaaatgttattagatcaatttaaatacaacgggctc
atcgtcaatgatgaggaattactcgaaaatctcgatacaacgcttgtcaacggccaatcg
ccactctttgccttcagtaagttaaagagcggtaagtttagctctaaacaactcgtcaca
cttaatcaacttgatttattgatggcacataacgaagacttaatcaaagaagcgggccag
gcgattttcgctggggacacagcattgaatccgattatgcgtccggatcgaacgaatgcc
ctaacgttgtcaccatttaagtcaattttccaattcgatgcgatgttacctgaaaataat
tatcgtcaactagaagcattagacgaaaaagcagtcctcgaacgcttaatgagtaaaaaa
ggagatggcaatcttgagtaa
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