Latilactobacillus sakei subsp. sakei: LCA_0910
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Entry
LCA_0910 CDS
T00299
Symbol
rexAN
Name
(GenBank) ATP-dependent exonuclease, subunit A (N terminal fragment), authentic frameshift
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_0910 (rexAN)
Enzymes [BR:
lsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCA_0910 (rexAN)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LCA_0910 (rexAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
DEAD
UvrD_C_2
AAA_16
ResIII
T2SSE
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAI55212
UniProt:
Q38X69
LinkDB
All DBs
Position
897612..900284
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AA seq
890 aa
AA seq
DB search
MAILSNPQFTPSQQAAVDHDGHDILVSASAGSGKTSVLVARVIQKILKGTDVDTLLVVTF
TEAAATEMRQRIQAALRDASEKATEPAVKQRLRQQLSLVPTAQISTLHAFCLKVIKQFYY
VIDRDPVFRLLSDTAERLLLADQVWQRVREAFYNHEYVKENEQDTLFYELAQNFSNDRND
DGLTDIVFELLDFANANSNPVKWLNKLPKSYAVDEAGLTASDYFQEKILPILQQTITECL
EALQEAEQLSKTSENLMIYAPQIATTQAALTQINADAKTLNWQAWRQQLTDAQLGPAKRT
KKLEPDEQINKDRLKADLDDVKKKIQTLLDTYFVFDEATTANIQRQAGQLVQKLVSVTLT
FREAFQAEKERRHLLDFSDLEQLCLTILSVEDSPARAFYQQKFSEVLVDEYQDTNPLQET
IIQKVTSDHPRNLFMVGDVKQSIYAFRLADPSLFKNKYNEFGVTEAERDSERIILAENFR
SRRNIDDFTNLIFKQLMDENLGELDYDENAALQYGARYYPDQHPTAPTELLLYETKPEEA
VANPQLDKSEGQVVAVAKRIQAMMTNGEQIWDKKLEKMRPIEYRDIVLLAPTRGNNLFIL
DYFKRFGLPVVIKDAQNYFQTTEVQIMLALLQVIDNPNQDIPLVSVLRSPIVGLNENELA
LIRINDKTDDYYQAVFNFIDQYNEQKVGHLGQQVMQKLTHFMALLTSFRTIARQQPIVDL
IWTIYQETGFLDYVGGMPAGRQRQANLHALYERATAYEENGFKGLFQFIQFIERLQKQDK
DLAQPTSLENQDAISVMTIHGSKGLEFPVVFLIDTSRRFNQQDLQRSYVLDNHGGLGVVY
LDSQKRLKVPTLPELAITAQKRKKLRAEEMLKTIRCFDTCGTMVNHRWPL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcttgagtaacccccaatttacaccttcacagcaagccgctgtcgatcatgat
ggccacgatattttagtatccgcatcagctggttcagggaagacatccgttcttgttgca
cgggtcatccagaaaatcttaaaagggaccgatgtcgatactttacttgttgtgaccttt
acggaggccgctgctactgaaatgcgccaacggattcaagcagctctacgcgatgctagc
gagaaagcgacagagccagccgttaaacagcgcttacggcaacaattaagtctcgtgcct
accgcacaaatcagtacactgcatgccttttgtttaaaggtcattaaacaattttattat
gtcattgatcgtgatcccgtattccgcttattgagtgataccgcagaacgactcctatta
gcggatcaagtatggcaacgggtgagagaggccttctacaatcacgaatatgtcaaagaa
aatgaacaagatacattattctacgaattagcccaaaatttctcgaatgatcgtaacgat
gacggcctgaccgacattgtttttgagttgctcgattttgcaaacgccaattccaacccg
gttaaatggttaaataaactacctaagagttatgctgttgatgaagctggtttgactgcc
agtgattatttccaagaaaaaatattacccattttacagcaaaccatcaccgaatgcttg
gaagccttacaagaagctgaacagctcagtaaaacaagcgaaaatctaatgatttatgcc
cctcaaattgcaactacgcaagcagccttaacacaaattaacgcagatgcaaaaacgttg
aattggcaagcatggcgccaacaactaacagatgcacagctggggcccgctaaacggact
aagaaattagaacccgacgaacaaattaataaggaccggttgaaagccgatttagatgac
gtcaaaaagaaaattcagacgttactggacacctattttgtgtttgatgaagcaaccacc
gctaatattcaacgtcaagctggccaattggttcaaaaattagtaagtgtcacgttaact
tttagagaagcctttcaagctgaaaaagaacggcgccatttattggactttagtgattta
gaacaactttgtctgacaattttatcggtagaggattcgccggcaagggccttttaccaa
caaaaatttagcgaagtgctagttgatgaataccaagataccaatccgctccaagaaacg
attatccaaaaggtcacttctgatcatccacgcaatctcttcatggtcggggatgttaag
cagtcaatttatgctttccgattggccgatccaagcttatttaagaataagtataacgaa
tttggtgtcacggaagctgaacgtgatagtgaacgaatcatcttagctgaaaacttccgt
tcgcgccgcaatatcgatgactttaccaatctgatttttaaacaattaatggacgaaaat
cttggtgaattagactatgacgaaaatgccgccttacaatatggtgctcgttattatcct
gaccagcacccaaccgcgccaaccgaactcttgctttatgaaactaagccggaagaggca
gttgccaacccgcaattagataagagtgagggccaagtcgtggcggtcgctaaacggatt
caagccatgatgactaatggggaacagatttgggataagaaactcgaaaaaatgcggccg
attgaatatcgggacatcgttttactagccccaacccgcggtaataatttgtttatcctg
gattactttaaacgcttcggcttgccggttgtgattaaggatgcgcaaaattatttccaa
acgactgaagtccaaattatgttagccctacttcaggtgattgataatcctaaccaagat
attccactggtcagtgttttacgctcaccaattgtcgggttaaacgaaaatgaattggca
ttaattcggattaacgataagacggatgattattatcaagcggtctttaactttattgac
caatataatgagcagaaagtcggccacttaggccaacaagtgatgcagaagctgacgcac
ttcatggctttattgacgtcgtttagaacaatcgctcgtcaacaaccgattgtggactta
atttggacgatctaccaagaaactggctttttagattatgtcggggggatgccagctgga
cgtcaacgtcaagctaatttacacgcgctttatgaacgtgccacggcgtatgaagaaaat
ggttttaaaggactcttccagttcattcagtttatcgaacgtcttcaaaaacaagataag
gatttagcacaaccaacgagcttagaaaatcaagacgccatctctgttatgaccattcac
gggagtaagggacttgaatttccagtcgtctttttaatcgatacgagtcgccgctttaac
caacaggatttacaacgctcatatgttttggataatcatggtggtttaggggtcgtttat
ttagatagccaaaagcggttgaaggtaccaacactgccagaattagcgattaccgcccag
aaacgaaaaaaattacgagcagaagaaatgctgaaaactatacgttgctttgacacgtgc
ggaacaatggttaatcatcgttggccattgtga
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