Latilactobacillus sakei subsp. sakei: LCA_1015
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Entry
LCA_1015 CDS
T00299
Symbol
hbsU
Name
(GenBank) Histone-like DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsa03032
]
LCA_1015 (hbsU)
03036 Chromosome and associated proteins [BR:
lsa03036
]
LCA_1015 (hbsU)
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_1015 (hbsU)
DNA replication proteins [BR:
lsa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LCA_1015 (hbsU)
Chromosome and associated proteins [BR:
lsa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LCA_1015 (hbsU)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LCA_1015 (hbsU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
DUF2780
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
CAI55317
UniProt:
Q38WW4
LinkDB
All DBs
Position
complement(1005637..1005912)
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AA seq
91 aa
AA seq
DB search
MANKAQLIENVASKTGLTKKDATAAVDAVFGSIQDTLKQGDKVQLIGFGTFEVRERAARK
GRNPQTGAEIKIPASKVPAFKPGKALKDSVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcacaattgatcgaaaacgttgcatcaaagactggtttaactaagaaa
gatgcaactgctgcagtagacgcagtatttggttcaatccaagacactttgaaacaaggt
gacaaagttcaactaatcggctttggtacattcgaagtacgtgaacgtgcagctcgtaag
ggccgtaacccacaaactggtgcagaaatcaagattcctgcaagcaaagtacctgcattc
aagccaggtaaagctttaaaggattctgttaaataa
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