Latilactobacillus sakei subsp. sakei: LCA_1043
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Entry
LCA_1043 CDS
T00299
Symbol
rnz
Name
(GenBank) Ribonuclease Z (RNAse Z)
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsa03016
]
LCA_1043 (rnz)
Enzymes [BR:
lsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LCA_1043 (rnz)
Transfer RNA biogenesis [BR:
lsa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LCA_1043 (rnz)
Prokaryotic type
LCA_1043 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
NAD_binding_10
L_PA-C-like
Motif
Other DBs
NCBI-ProteinID:
CAI55345
UniProt:
Q38WT6
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All DBs
Position
complement(1034360..1035298)
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AA seq
312 aa
AA seq
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MELEFLGTGAGVPARQRNVTSIALKLLDERNEVWLFDVGEATQHQILKTTLKPRKVKKIF
LTHLHGDHLFGLPGFLSSRSFQGGDEPLTIYGPKGTEEYVRTSLKLSESHLTYALKFVVL
PENGVIIDDKTFRVECAKLDHRIASYGFRIVEKDHPGELQVEKLQADGVPSGPVYARIKN
GETVTLSDGREIDGRNYIGNAQKGRIVTIIGDTRNCEAITRLAENADVLVHESTFGKQEQ
KIARQYYHSTNINAAKVAKTAHVKRLLLTHISARYLGQAVRELQNDARDIFKNTRVVSDL
DLYDIPFHGRKE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaatttcttggtactggtgcgggtgttcctgcccgtcaacgtaacgtcacg
agtattgcattaaaattattggatgaacggaatgaagtgtggttattcgacgttggtgaa
gcaacgcaacaccaaattcttaaaacaacgttaaaaccacggaaagttaagaaaatcttt
ttaacgcatttgcatggtgatcatttattcgggttaccgggcttcttatcaagccgttca
tttcaaggtggcgacgaaccgttgacgatttatggccccaaaggaacagaagaatacgtt
cggacgagtttaaaactttccgaaagtcacttaacgtatgccttgaagttcgttgtatta
ccagaaaatggtgtcattattgatgacaaaacattccgggtcgaatgtgcaaaattggat
caccggattgcaagttacggttttagaattgttgaaaaagatcatcctggtgaattacag
gttgaaaaactacaagctgacggtgtcccttcaggtcccgtttatgcccggattaaaaat
ggtgaaacagtcacattgagtgatggccgcgaaattgacggtcgtaactacatcggtaac
gcacaaaaaggacggattgtgaccattattggcgatacccgcaattgtgaagcgattacg
cgcctagccgaaaacgccgatgttttagtccatgaaagtacatttggcaagcaagaacaa
aaaattgcgcgtcaatactaccattcaactaatatcaatgcagccaaggttgccaaaaca
gcacatgtcaaacgcctattactcacgcatatttcagcccgttatttaggccaagctgtg
cgtgaattacaaaatgatgcccgcgatattttcaaaaatacgcgtgtcgttagcgattta
gatttgtatgatattccatttcatggtcggaaggagtaa
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