Latilactobacillus sakei subsp. sakei: LCA_1256
Help
Entry
LCA_1256 CDS
T00299
Symbol
polC
Name
(GenBank) DNA-directed DNA polymerase III, polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03030
DNA replication
lsa03430
Mismatch repair
lsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCA_1256 (polC)
03430 Mismatch repair
LCA_1256 (polC)
03440 Homologous recombination
LCA_1256 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsa03032
]
LCA_1256 (polC)
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_1256 (polC)
Enzymes [BR:
lsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCA_1256 (polC)
DNA replication proteins [BR:
lsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCA_1256 (polC)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCA_1256 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DEDDh_C
RNase_H_2
HHH_3
T2SSK
DUF655
Auto_anti-p27
DNApol_Exo
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CAI55560
UniProt:
Q38W73
LinkDB
All DBs
Position
complement(1233491..1237831)
Genome browser
AA seq
1446 aa
AA seq
DB search
MALDQTALFQKLLEQIALPADVAHYPGFKTGQVEQVIVHETSKRWTFKLHFDNVLPFAVY
TAFEEHLEAAFQAIAAVSIEISTDAKELDGGVLAAYWEYVVNHSGIQSSLLHELCAKETP
YIEGRKVLLVVENDIVKTFFINQAQTTIQAGYKRLGFPNFAIQPLIDESASQKSIEDFQA
KRAVQDAERAQAAAEAIKKNEALKEKRKTEGKPVDGPIVMGRGINPAEPVRQMISITEEE
RSIVIEGFIFDKEVRVLRSGRQLLILKMTDYSSSFTVKKFSRDASDESLFAAIDKGMWFK
VRGSVQEDNFMRDLTVNANDLVEVSHPKREDTATDGKRIEMHLHTNMSQMDATNPIGDYV
KQAAKWGQPAIAVTDHYNLQAFPDAYAAGKKNGVKILYGVEVNLVNDGTPVVYNLRDQVL
ESAEYVIFDVETTGLSAVYDSIIELAAVKMRDGEVVASFDEFIDPERPLSAFTTQLTSIT
NEMVHGAKKEAEVLAMFKEFTGDAVLAGHNVSFDMGFLNAGYERNDIDLIDNPVIDTLEL
SRMLHPEYKNHKLDSLTKRYKINLEHHHRANADAESTGYLLYKLEKEAAENYDMVNVNQL
NDRVGVGEFYKQARPAHAVLMAQTQAGLKNLFKLVSASMTEYYYRTPRLPKSKLDALREG
ILVGSACSNGEVFEAMMQKGYNEALDRAKYYDYIEVMPKAVYAPLLERELVRDNRALEEI
IRNLVKVGEKLNKPVVATGDAHYLNPEDAIYRKILIHSMGGANPLNRSKLPDVHFRSTDE
MLTAFDFLGPELAQELVVANPQKIADQIDEIVPVKDKLYTPKMAGAEDEIQTLTMNRAHE
LYGAELPEIVEARLKKELKSIIGNGFSVIYLISQKLVYKSGKDGYLVGSRGSVGSSLVAT
MTGITEVNPLPPHYRCSNCHYSEFFTKGEVGSGYDLADKDCPECGTPLDKDGHDIPFETF
LGFHGDKVPDIDLNFSGDYQPVAHNYTKVLFGENNVFRAGTIGTVADKTAYGYVKAYERD
TEQTFRGAEVDRLAKGSTGVKRTTGQHPAGIIVVPDYMDIYDFTPIQFPADDQDAAWKTT
HFDFHSIHDNILKLDILGHDDPTMIRMLQDLSGIDPKSIPTDDPGVMALFSGTDSLGVTP
EQINSKMGTLGVPEFGTRFVRGMLEETHPTTFSELLQISGLSHGTDVWLGNAEELINKGV
VTLKDVIGCRDNIMMDLIHWGMDDSMSFNIMERVRKGKGIPDDWQQAMRDNENVPDWYID
SCLKIKYMFPKAHATAYILMALRIAYFKVYFPIIYYCAYFSVRASDFDLVAMAQGKEGVK
ARMKEITDKGMEASTKEKNLLTVLEIANECLERGITIKMVDIEKSDSSDFLIQDDHTLLA
PFRAVPSLGDNVAKQIVSAREEKPFLSKEDLSNRGKVSKTLIEYLTENNVLNDLPDENQL
SLFDMM
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
gtggcattagatcaaaccgcattgtttcaaaaattattagaacagattgctttacctgcg
gatgtcgcgcactatcccggctttaaaacggggcaggtcgagcaagtgattgtccacgaa
acgtcaaaacggtggacctttaaattacacttcgataacgtgttaccctttgcggtttac
acagcatttgaagaacatttagaagcggcttttcaagcgattgcggccgtttcaattgaa
atcagtaccgatgctaaagaacttgatggtggtgttttagccgcttattgggaatatgtc
gtcaatcatagtgggattcaatcgtcactcttgcatgaattatgtgccaaggagacgccc
tatattgaaggccgcaaagtcttattggttgttgaaaatgacattgttaaaacctttttc
atcaatcaagcgcaaacgacgattcaagccggttataaacgcctaggcttccccaacttt
gcgattcaaccattaatcgatgaatcagcttctcaaaaatcaatcgaagatttccaagca
aaacgggcagtgcaagatgctgaacgtgcgcaagcagctgccgaagcaatcaagaaaaac
gaagcgctcaaagaaaaacgtaaaaccgaaggcaagccagttgatggcccaatcgtgatg
ggtcgcgggattaatccagctgaaccagttcgtcagatgattagtatcactgaagaggaa
cgttcaatcgtgattgaaggctttatctttgataaagaagtccgggtgctccgttctggt
cgccaattattaattttgaagatgactgattactcatcctcatttacggttaagaagttc
tcaagagatgctagcgatgaaagtttattcgccgcaattgataaagggatgtggtttaag
gttcgcgggagtgtccaagaagataacttcatgcgtgatttaacggttaacgccaacgat
ttagttgaagttagtcatcctaaacgtgaagatacagcgactgatggtaagcgaatcgaa
atgcatttgcataccaacatgtctcaaatggacgcgaccaacccaatcggcgattacgtc
aaacaagccgctaagtggggccaaccggcgattgccgtgaccgatcactataatctccaa
gcctttccggatgcttatgccgctgggaagaaaaatggcgtcaagattttatacggcgtc
gaagtcaatttggtcaacgatggcacgccagtcgtttataacttgcgcgaccaagttcta
gaatcagctgaatacgtaatttttgatgtggaaacgactggtttgtcagccgtttatgat
tcaattatcgaattggctgcggtcaaaatgcgcgatggtgaagtcgtcgcctcgttcgat
gaatttatcgatccagagcgaccactatcagccttcacaacgcaattgactagtatcacc
aacgaaatggttcatggtgccaagaaggaagctgaagtcttggcaatgttcaaggaattt
actggcgatgccgtcttagccggtcataacgttagtttcgatatgggcttcttgaacgcg
ggttatgaacggaacgatattgacctgatcgacaacccagtcattgataccttggaatta
tcgcggatgttgcatcctgaatacaagaatcataagttggattcattgaccaagcgctac
aagatcaacctagaacaccatcatcgagctaatgccgatgctgaatcaactggttattta
ttgtataagttggaaaaagaagccgctgaaaattacgatatggtgaacgtcaatcaattg
aatgatcgtgttggggtcggcgagttttacaaacaagcccgcccagcacatgcggtctta
atggcgcaaacccaagctggtttgaagaatttattcaaattggtttcagcctcaatgacc
gaatactattaccggacaccgcgcttgcctaagagtaaactcgatgccttacgcgaagga
attttagtcggttccgcctgcagtaatggtgaagtctttgaagcgatgatgcaaaaaggg
tataacgaagcgctcgatcgtgctaaatactacgattacatcgaagtgatgcccaaagcg
gtttacgcgccattattggaacgtgaattggtgcgcgacaatcgcgcgcttgaagaaatc
attcgcaacttagttaaagtcggcgaaaaactcaacaaaccagttgtcgcaactggcgat
gcccattatttgaacccagaagacgcgatttatcggaagattctgattcactcaatgggc
ggggctaaccccttgaaccgttcgaagttaccagatgttcatttccgctcaacggatgaa
atgttgacggcgtttgacttcctggggccagaattagcgcaagaattagtcgtggccaat
ccgcaaaaaattgctgatcaaatcgacgaaattgtgccggttaaagataaactctacacg
cctaagatggccggtgccgaagacgaaattcaaaccttaacgatgaatcgtgcgcacgaa
ttgtacggagctgagttacctgaaattgtcgaagcccgtttgaaaaaggaattgaagagt
atcatcgggaatggattctccgttatttacctgatttctcaaaaattggtttataagagt
ggcaaggatgggtacttggttggttcccgggggtctgtcggttcgagtttagtcgcaacc
atgaccgggatcaccgaagttaacccgttaccaccgcattatcggtgttctaactgtcac
tactccgaattctttaccaaaggggaagttggttcgggttacgatttagcggacaaagat
tgccctgaatgtggcacgccacttgataaggatggtcatgatattccgttcgaaactttc
cttggcttccacggggataaggtgccggatattgatttgaacttctccggtgattatcaa
ccagtcgcccataattatacgaaggtcttgttcggtgaaaataacgtgttccgggccggg
acaattggaacggtcgctgataaaacggcgtacggttatgttaaagcctatgaacgtgat
acggaacaaactttccgcggggctgaagtcgatcggttggcaaaaggctcgaccggtgtt
aaacggacaactggccaacatccagctgggattatcgttgtgcctgattacatggatatc
tatgattttacgccaatccaattcccagctgatgatcaagatgccgcttggaagaccacc
cattttgatttccattcgatccatgataatatcttgaagctcgatatcctgggccatgat
gatcccacgatgattcggatgctccaagatctctctgggattgatcctaaatcaattcca
actgatgatccgggcgtgatggccttgttctccggcactgattcactcggcgtgacgcct
gaacagattaattcgaagatgggcaccttgggcgtgccagaattcgggacgcgttttgtt
cgcggaatgttggaagaaacacatccaacaaccttctcagaactactccaaatttctggc
ctttctcatgggaccgacgtgtggttgggtaacgccgaagaattgattaataaaggcgtt
gtcaccctgaaagacgttatcggttgtcgtgataatatcatgatggatttaattcactgg
ggaatggacgatagtatgtccttcaacattatggaacgtgttcgtaaaggcaaggggatt
ccggatgattggcaacaagccatgcgcgataatgaaaacgtgccggattggtatattgat
tcttgtctcaagattaaatatatgttcccgaaagcccatgcgaccgcctatattttgatg
gcgcttcggattgcctatttcaaagtgtacttcccaattatttattactgtgcttacttc
agtgtgcgggccagtgacttcgatctcgtggcgatggcccaaggtaaagaaggcgtcaag
gcgcgcatgaaggaaatcacggataaagggatggaagccagcacgaaagaaaagaacttg
ttaaccgtgcttgaaatcgccaatgaatgtttggaacgcggcatcacaattaagatggtc
gacatcgaaaaatcagattcatctgatttcttgatccaagacgaccataccttactcgca
ccattccgcgccgtcccaagtctaggcgataacgttgctaagcaaatcgtctccgcccgc
gaagaaaaacctttcttatctaaggaagacttatctaaccgtgggaaagtctcaaaaaca
ttgattgaatatttaacagaaaacaatgtcttgaatgatttacccgatgaaaatcaatta
tcgttatttgatatgatgtaa
DBGET
integrated database retrieval system
