Latilactobacillus sakei subsp. sakei: LCA_1316
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Entry
LCA_1316 CDS
T00299
Symbol
rluA3
Name
(GenBank) Pseudouridylate synthase, 23S rRNA-specific
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsa03009
]
LCA_1316 (rluA3)
Enzymes [BR:
lsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LCA_1316 (rluA3)
Ribosome biogenesis [BR:
lsa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LCA_1316 (rluA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF7281
Motif
Other DBs
NCBI-ProteinID:
CAI55620
UniProt:
Q38W13
LinkDB
All DBs
Position
complement(1288899..1289801)
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AA seq
300 aa
AA seq
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MMEIKWQVATQQSQTMKQFLLKNGISQRLYAKIKSQGLPVRLNNRLSSPADQVQNGDQVS
LTLPAELADETVAVSGVPIKVLYEDDYWLVVNKPAGLATIPGPTNTTDTLLNRIKGYWQQ
NGATDLVPHIITRLDFDTSGIVLAAKHQVAQSLLQPQIEQHQLQKFYLAVVAGTGLPEFG
TIKAPIGRVGVEPRRRVIADGQSAWTDYWRLAQDERLTVLKVQIHTGRTHQIRVHLSDLD
HPLVGDQLYEGPLGWGIDRQALHAYQLTFNDPFSQQKRQFTAPIPADIQAILPTKINDKL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgatggaaattaaatggcaagtcgccacacaacaatcacaaacaatgaaacagttcctt
ctaaaaaatgggattagtcagcgcctatatgccaaaattaagtcgcagggtctaccggtt
cgcttaaataatcggttaagcagtcccgctgaccaagttcaaaacggcgatcaggtcagt
ctgacattacctgcagaactagccgacgaaacggtcgcggtcagtggagtaccgattaaa
gtgctctatgaggatgactactggttagtcgtgaacaaaccggctggcctggcaacaatc
cctggaccaactaatacgacagatacgttgttgaaccggattaaaggttactggcaacaa
aatggcgcgaccgatttagtaccccatattatcacccgtcttgattttgacacgagcggg
attgtgttagcggctaaacaccaagtagcccaaagcttacttcaaccgcagattgaacaa
catcaattgcaaaaattttatctagcagttgttgcggggactgggctccctgaatttggg
acgattaaagcaccgattggccgtgtcggggttgaaccacgtcggcgggtgattgctgac
ggacaaagtgcttggactgattattggcgtttagcacaagatgagcgcttaactgtctta
aaagtccagattcacaccggccgaacacatcaaattcgtgttcacttgagtgatttagat
catccgttagttggtgatcaactttatgaggggccgcttggttggggaattgaccgccaa
gcattacatgcgtaccaattaacctttaatgatccgttcagtcaacagaaaagacagttt
acagcgccgattccggcggacattcaagctattttaccaactaaaattaatgacaagctg
taa
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