Latilactobacillus sakei subsp. sakei: LCA_1339
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Entry
LCA_1339 CDS
T00299
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03030
DNA replication
lsa03430
Mismatch repair
lsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCA_1339 (dnaQ)
03430 Mismatch repair
LCA_1339 (dnaQ)
03440 Homologous recombination
LCA_1339 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsa03032
]
LCA_1339 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_1339 (dnaQ)
Enzymes [BR:
lsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCA_1339 (dnaQ)
DNA replication proteins [BR:
lsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCA_1339 (dnaQ)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCA_1339 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAI55643
UniProt:
Q38VZ0
LinkDB
All DBs
Position
1310669..1311205
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AA seq
178 aa
AA seq
DB search
MNFVAMDFETANGQRDSACSIALVVVRNDQIVDQFYTLIKPETYFSSRNSQIHGIYEDDV
AQAPKFDQVWPHIAPFFTPQKLVVAHNATFDIGVLRSTLQHYDIPEPHYLALDTLTTSRR
LYPQFKNHKLNTLCTNLEIPLENHHNALADSIACAKILIKEAQEFGTDPLKQVTKIIG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttcgttgcaatggattttgaaaccgccaatggtcaacgcgacagtgcttgttca
attgcactagtcgttgttcgtaacgaccaaattgtcgatcaattttacacccttattaaa
cccgaaacttattttagtagccgtaatagccagattcacggtatttatgaagatgatgtg
gcccaagcccctaagtttgatcaagtttggccacacatcgcaccttttttcacaccgcaa
aaattagttgtggcgcacaatgcgacctttgatatcggtgtccttcgtagcacactccaa
cactacgacatcccagaacctcactatttagccctcgacactttaacaactagtcgtcgg
ctttatccccaatttaaaaatcataagttaaatacattatgtaccaacttagaaattcca
ctcgaaaatcaccacaatgcgctagctgacagtatcgcatgcgccaaaattctgattaaa
gaagcacaagagtttggcacagacccactaaaacaggtcacaaaaataatcggctag
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